Initial data commit

Task/Bioinformatics-base-count/Python/bioinformatics-base-count-2.py

@@ -0,0 +1,54 @@
+"""
+	Python 3.10.5 (main, Jun  6 2022, 18:49:26) [GCC 12.1.0] on linux
+
+	Created on Wed 2022/08/17 11:19:31
+	
+"""
+
+
+def main ():
+
+	def DispCount () :
+
+	    return f'\n\nBases :\n\n' + f''.join ( [ f'{i} =\t{D [ i ]:4d}\n' for i in  sorted ( BoI ) ] )
+
+
+	S =	'CGTAAAAAATTACAACGTCCTTTGGCTATCTCTTAAACTCCTGCTAAATGCTCGTGCTTTCCAATTATGTAAGCGTTCCGAGACGGGGTGGTCGATTCTG' \
+		'AGGACAAAGGTCAAGATGGAGCGCATCGAACGCAATAAGGATCATTTGATGGGACGTTTCGTCGACAAAGTCTTGTTTCGAGAGTAACGGCTACCGTCTT' \
+		'CGATTCTGCTTATAACACTATGTTCTTATGAAATGGATGTTCTGAGTTGGTCAGTCCCAATGTGCGGGGTTTCTTTTAGTACGTCGGGAGTGGTATTATA' \
+		'TTTAATTTTTCTATATAGCGATCTGTATTTAAGCAATTCATTTAGGTTATCGCCGCGATGCTCGGTTCGGACCGCCAAGCATCTGGCTCCACTGCTAGTG' \
+		'TCCTAAATTTGAATGGCAAACACAAATAAGATTTAGCAATTCGTGTAGACGACCGGGGACTTGCATGATGGGAGCAGCTTTGTTAAACTACGAACGTAAT'
+
+	All   = set( S )
+	
+	BoI   = set ( [ "A","C","G","T" ] )
+	
+	other = All - BoI
+	
+	D     = { k : S.count ( k ) for k in All }
+	
+	print ( 'Sequence:\n\n')
+
+	print ( ''.join ( [ f'{k:4d} : {S [ k: k + 50 ]}\n' for k in range ( 0, len ( S ), 50 ) ] ) )
+
+	print ( f'{DispCount ()} \n------------')
+
+	print ( '' if ( other == set () ) else f'Other\t{sum ( [ D [ k ] for k in sorted ( other ) ] ):4d}\n\n' )
+
+	print ( f'Σ = \t {sum ( [ D [ k ] for k in sorted ( All ) ] ) } \n============\n')
+	
+	pass
+
+
+def test ():
+
+	pass
+
+
+## START
+
+LIVE = True
+
+if ( __name__ == '__main__' ) :
+
+	main () if LIVE else test ()