RosettaCodeData/Task/Bioinformatics-base-count/Quackery/bioinformatics-base-count.quackery
2023-07-01 13:44:08 -04:00

50 lines
1.6 KiB
Text

[ over size -
space swap of
swap join ] is justify ( $ n --> $ )
[ 0 swap
[ dup $ "" != while
cr over number$
4 justify echo$
5 times
[ dup $ "" = iff
conclude done
sp
10 split swap echo$ ]
dip [ 50 + ] again ]
2drop ] is prettyprint ( $ --> )
[ stack ] is adenine ( --> s )
[ stack ] is cytosine ( --> s )
[ stack ] is guanine ( --> s )
[ stack ] is thymine ( --> s )
[ table
adenine cytosine
guanine thymine ] is bases ( --> [ )
[ 4 times
[ 0 i^ bases put ]
witheach
[ $ "ACGT" find bases
1 swap tally ]
4 times
[ sp
i^ bases dup echo
sp share echo cr ]
0 4 times
[ i^ bases take + ]
cr say " total " echo ] is tallybases ( [ --> )
$ "CGTAAAAAATTACAACGTCCTTTGGCTATCTCTTAAACTCCTGCTAAATG"
$ "CTCGTGCTTTCCAATTATGTAAGCGTTCCGAGACGGGGTGGTCGATTCTG" join
$ "AGGACAAAGGTCAAGATGGAGCGCATCGAACGCAATAAGGATCATTTGAT" join
$ "GGGACGTTTCGTCGACAAAGTCTTGTTTCGAGAGTAACGGCTACCGTCTT" join
$ "CGATTCTGCTTATAACACTATGTTCTTATGAAATGGATGTTCTGAGTTGG" join
$ "TCAGTCCCAATGTGCGGGGTTTCTTTTAGTACGTCGGGAGTGGTATTATA" join
$ "TTTAATTTTTCTATATAGCGATCTGTATTTAAGCAATTCATTTAGGTTAT" join
$ "CGCCGCGATGCTCGGTTCGGACCGCCAAGCATCTGGCTCCACTGCTAGTG" join
$ "TCCTAAATTTGAATGGCAAACACAAATAAGATTTAGCAATTCGTGTAGAC" join
$ "GACCGGGGACTTGCATGATGGGAGCAGCTTTGTTAAACTACGAACGTAAT" join
dup prettyprint cr cr tallybases