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test github action [ci skip]
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82
contrib/git.nwchem/github_actions_tahoma_test.txt
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82
contrib/git.nwchem/github_actions_tahoma_test.txt
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name: NWChem_CI_tahoma_test
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on:
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repository_dispatch:
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types: [backend_automation]
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workflow_dispatch:
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jobs:
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build_workflow:
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uses: ./.github/workflows/update_main.yml
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secrets:
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inherit
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build_singularity:
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needs: [build_workflow]
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uses: edoapra/nwchem-singularity/.github/workflows/apptainer_action.test.yml@master
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secrets:
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inherit
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test_on_tahoma:
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needs: [build_singularity]
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runs-on: ${{ matrix.os }}
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timeout-minutes: 2880
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strategy:
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matrix:
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os:
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- [self-hosted, centos7]
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branch:
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- master
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sing_image:
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- ompi41x.ifx
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- ompi41x.ifort
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- ompi41x
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- mpi-ts.ompi41x.ifort
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fail-fast: false
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env:
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USE_LIBXC: 1
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COMEX_MAX_NB_OUTSTANDING: 8
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SINGULARITYENV_NWCHEM_BASIS_LIBRARY: /cluster/apps/nwchem/nwchem/src/basis/libraries/
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SINGULARITYENV_SCRATCH_DIR: /big_scratch
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APPTAINERENV_NWCHEM_BASIS_LIBRARY: /cluster/apps/nwchem/nwchem/src/basis/libraries/
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APPTAINERENV_SCRATCH_DIR: /big_scratch
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MPIRUN_NPOPT: -n
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NWCHEM_EXECUTABLE: "singularity exec /big_scratch/nwchems.img nwchem "
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steps:
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- name: nwchem version tag
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run: |
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if [[ ${{ matrix.branch }} == master ]]; then
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echo "nwversion=dev" >> $GITHUB_ENV
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else
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echo "nwversion=720" >> $GITHUB_ENV
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fi
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- name: dir name
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run: |
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echo "dirname=nwchem-${{ env.nwversion }}${{ github.nwversion }}.${{ github.run_id }}.${{ github.run_number }}.${{ matrix.sing_image }}" >> $GITHUB_ENV
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- name: Checkout QA code
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run: |
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pwd
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cd ..
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rm -rf ${{ env.dirname }}
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wget -q https://github.com/${{ github.repository_owner }}/nwchem/tarball/${{ matrix.branch }} -O - | tar -xz --exclude=src --exclude=contrib --exclude=web --exclude=examples --exclude=doc --exclude=travis --exclude="nwxc*" --exclude="chem-library-tests"
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mv ${{ github.repository_owner }}-nwchem-* ${{ env.dirname }}
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ls -lr ${{ env.dirname }}/QA
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shell: bash
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- name: load singularity image
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run: |
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export https_proxy=http://proxy.emsl.pnl.gov:3128
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singularity pull -F --name ./nwchems_`id -u`.img oras://ghcr.io/edoapra/nwchem/nwchem-${{ env.nwversion }}.${{ matrix.sing_image }}:latest
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srun -N $SLURM_NNODES -n $SLURM_NNODES cp ./nwchems_`id -u`.img /big_scratch/nwchems.img
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shell: bash
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- name: run qa tests
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run: |
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cd ../${{ env.dirname }}/QA
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env|egrep SLUR
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source /etc/profile.d/modules.sh
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module purge
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module load gcc/9.3.0
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module load openmpi/4.1.4
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export https_proxy=http://proxy.emsl.pnl.gov:3128
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export MPIRUN_PATH=`which srun`
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MYNN=$(( $SLURM_NNODES*$SLURM_NTASKS_PER_NODE ))
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echo MYNN is $MYNN
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(echo ${{ env.nwversion }}.${{ matrix.sing_image }}; ./doqmtests.mpi $MYNN flaky ; echo ${{ env.nwversion }}.${{ matrix.sing_image }}) | tee >(ts "%d%b%Y %H:%M:%S" > ../../../../doqmtests.mpi.log.` date +%b%d%Y_%H:%M`)
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shell: bash
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