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QA test for cosmo parameter file
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23
QA/tests/cosmo_params/cosmo_params.nw
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23
QA/tests/cosmo_params/cosmo_params.nw
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@ -0,0 +1,23 @@
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start cosmo_params
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#permanent_dir ./perm
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#scratch_dir ./data
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echo
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title "h2o"
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geometry nocenter noautosym
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OW .0000000000 .0000000000 -.0486020332
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HW .7545655371 .0000000000 .5243010666
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H -.7545655371 .0000000000 .5243010666
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end
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basis
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* library 6-31g**
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end
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cosmo
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dielec 78.0
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parameters marat.par
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rsolv 0.50
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lineq 0
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# radius 1.40
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# 1.06
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# 1.16
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end
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task dft energy
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745
QA/tests/cosmo_params/cosmo_params.out
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745
QA/tests/cosmo_params/cosmo_params.out
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@ -0,0 +1,745 @@
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refund: UserID = marat
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refund: SLURM Job ID = 1032777
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refund: Number of nodes = 4
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refund: Number of cores per node = 16
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refund: Number of cores = 64
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refund: Amount of time requested = 30
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refund: Directory = /home/marat/codes/nwchem-dev/QA/tests/cosmo_params
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Processor list
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g[0-3]
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argument 1 = /home/marat/codes/nwchem-dev/QA/tests/cosmo_params/cosmo_params.nw
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============================== echo of input deck ==============================
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start cosmo_params
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permanent_dir ./perm
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scratch_dir ./data
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echo
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title "h2o"
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geometry nocenter noautosym
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OW .0000000000 .0000000000 -.0486020332
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HW .7545655371 .0000000000 .5243010666
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H -.7545655371 .0000000000 .5243010666
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end
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basis
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* library 6-31g**
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end
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cosmo
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dielec 78.0
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parameters marat.par
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rsolv 0.50
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lineq 0
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# radius 1.40
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# 1.06
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# 1.16
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end
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task dft energy
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================================================================================
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Northwest Computational Chemistry Package (NWChem) 6.3
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------------------------------------------------------
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Environmental Molecular Sciences Laboratory
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Pacific Northwest National Laboratory
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Richland, WA 99352
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Copyright (c) 1994-2013
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Pacific Northwest National Laboratory
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Battelle Memorial Institute
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NWChem is an open-source computational chemistry package
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distributed under the terms of the
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Educational Community License (ECL) 2.0
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A copy of the license is included with this distribution
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in the LICENSE.TXT file
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ACKNOWLEDGMENT
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--------------
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This software and its documentation were developed at the
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EMSL at Pacific Northwest National Laboratory, a multiprogram
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national laboratory, operated for the U.S. Department of Energy
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by Battelle under Contract Number DE-AC05-76RL01830. Support
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for this work was provided by the Department of Energy Office
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of Biological and Environmental Research, Office of Basic
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Energy Sciences, and the Office of Advanced Scientific Computing.
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Job information
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---------------
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hostname = g0
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program = /scratch/nwchem
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date = Wed Feb 5 15:45:38 2014
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compiled = Wed_Feb_05_15:41:04_2014
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source = /home/marat/codes/nwchem-dev
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nwchem branch = Development
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nwchem revision = 25198
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ga revision = 10467
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input = /home/marat/codes/nwchem-dev/QA/tests/cosmo_params/cosmo_params.nw
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prefix = cosmo_params.
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data base = ./perm/cosmo_params.db
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status = startup
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nproc = 64
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time left = -1s
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Memory information
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------------------
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heap = 13107201 doubles = 100.0 Mbytes
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stack = 13107201 doubles = 100.0 Mbytes
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global = 26214400 doubles = 200.0 Mbytes (distinct from heap & stack)
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total = 52428802 doubles = 400.0 Mbytes
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verify = yes
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hardfail = no
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Directory information
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---------------------
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0 permanent = ./perm
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0 scratch = ./data
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NWChem Input Module
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-------------------
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h2o
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---
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Scaling coordinates for geometry "geometry" by 1.889725989
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(inverse scale = 0.529177249)
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------
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auto-z
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------
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Geometry "geometry" -> ""
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-------------------------
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Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
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No. Tag Charge X Y Z
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---- ---------------- ---------- -------------- -------------- --------------
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1 OW 8.0000 0.00000000 0.00000000 -0.04860203
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2 HW 1.0000 0.75456554 0.00000000 0.52430107
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3 H 1.0000 -0.75456554 0.00000000 0.52430107
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Atomic Mass
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-----------
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OW 15.994910
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HW 1.007825
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H 1.007825
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Effective nuclear repulsion energy (a.u.) 9.2874668371
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Nuclear Dipole moment (a.u.)
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----------------------------
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X Y Z
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---------------- ---------------- ----------------
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0.0000000000 0.0000000000 1.2468145009
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Z-matrix (autoz)
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--------
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Units are Angstrom for bonds and degrees for angles
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Type Name I J K L M Value
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----------- -------- ----- ----- ----- ----- ----- ----------
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1 Stretch 1 2 0.94741
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2 Stretch 1 3 0.94741
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3 Bend 2 1 3 105.58490
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XYZ format geometry
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-------------------
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3
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geometry
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OW 0.00000000 0.00000000 -0.04860203
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HW 0.75456554 0.00000000 0.52430107
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H -0.75456554 0.00000000 0.52430107
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==============================================================================
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internuclear distances
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------------------------------------------------------------------------------
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center one | center two | atomic units | angstroms
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------------------------------------------------------------------------------
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2 HW | 1 OW | 1.79035 | 0.94741
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3 H | 1 OW | 1.79035 | 0.94741
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------------------------------------------------------------------------------
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number of included internuclear distances: 2
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==============================================================================
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==============================================================================
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internuclear angles
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------------------------------------------------------------------------------
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center 1 | center 2 | center 3 | degrees
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------------------------------------------------------------------------------
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2 HW | 1 OW | 3 H | 105.58
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------------------------------------------------------------------------------
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number of included internuclear angles: 1
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==============================================================================
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library name resolved from: environment
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library file name is: <
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/home/scicons/felicia/apps/nwchem/nwchem-6.3/src/basis/libraries/>
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Summary of "ao basis" -> "" (cartesian)
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------------------------------------------------------------------------------
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Tag Description Shells Functions and Types
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---------------- ------------------------------ ------ ---------------------
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* 6-31g** on all atoms
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Keyword RSOLV is obsolete and ignored (see York, Karplus, doi:10.1021/jp992097l
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)
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NWChem DFT Module
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-----------------
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h2o
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Basis "ao basis" -> "ao basis" (cartesian)
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-----
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OW (Oxygen)
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-----------
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Exponent Coefficients
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-------------- ---------------------------------------------------------
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1 S 5.48467170E+03 0.001831
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1 S 8.25234950E+02 0.013950
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1 S 1.88046960E+02 0.068445
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1 S 5.29645000E+01 0.232714
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1 S 1.68975700E+01 0.470193
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1 S 5.79963530E+00 0.358521
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2 S 1.55396160E+01 -0.110778
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2 S 3.59993360E+00 -0.148026
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2 S 1.01376180E+00 1.130767
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3 P 1.55396160E+01 0.070874
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3 P 3.59993360E+00 0.339753
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3 P 1.01376180E+00 0.727159
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4 S 2.70005800E-01 1.000000
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5 P 2.70005800E-01 1.000000
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6 D 8.00000000E-01 1.000000
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HW (Hydrogen)
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-------------
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Exponent Coefficients
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-------------- ---------------------------------------------------------
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1 S 1.87311370E+01 0.033495
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1 S 2.82539370E+00 0.234727
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1 S 6.40121700E-01 0.813757
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2 S 1.61277800E-01 1.000000
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3 P 1.10000000E+00 1.000000
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H (Hydrogen)
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------------
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Exponent Coefficients
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-------------- ---------------------------------------------------------
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1 S 1.87311370E+01 0.033495
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1 S 2.82539370E+00 0.234727
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1 S 6.40121700E-01 0.813757
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2 S 1.61277800E-01 1.000000
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3 P 1.10000000E+00 1.000000
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Summary of "ao basis" -> "ao basis" (cartesian)
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------------------------------------------------------------------------------
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Tag Description Shells Functions and Types
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---------------- ------------------------------ ------ ---------------------
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OW 6-31g** 6 15 3s2p1d
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HW 6-31g** 3 5 2s1p
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H 6-31g** 3 5 2s1p
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Summary of "ao basis" -> "ao basis" (cartesian)
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------------------------------------------------------------------------------
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Tag Description Shells Functions and Types
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---------------- ------------------------------ ------ ---------------------
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OW 6-31g** 6 15 3s2p1d
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HW 6-31g** 3 5 2s1p
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H 6-31g** 3 5 2s1p
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looking for parfile in /home/marat/data/marat.par
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looking for parfile in ./perm/marat.par
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looking for parfile in ./marat.par
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found parfile in ./marat.par
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processing cosmo parameter file ./marat.par
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N 2.12600
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HW 1.06000
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H 1.16000
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O 1.40000
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C 1.63500
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setting custom COSMO radius based on element match: O O 1.400
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setting custom COSMO radius based on name match: HW 1.060
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setting custom COSMO radius based on name match: H 1.160
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---------------
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-cosmo- solvent
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---------------
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dielectric constant -eps- = 78.00
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charge screening approach = 2
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screen = (eps-1)/(eps ) = 0.98718
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-lineq- algorithm = 0
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-bem- low level = 2
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-bem- high level = 2
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-bem- from -octahedral-
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solvent radius (ang.) = 0.500
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gaussian surface charge width = 0.98000
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degree of switching = 1.00000
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switching function tolerance = 0.00010
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atomic radii =
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--------------
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1 8.000 1.400
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2 1.000 1.060
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3 1.000 1.160
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solvent accessible surface
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--------------------------
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---------- ATOMIC COORDINATES (A.U.) ------------ VDWR(ANG.) --
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1 0.00000000 0.00000000 -0.09184453 1.400
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2 1.42592211 0.00000000 0.99078535 1.060
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3 -1.42592211 0.00000000 0.99078535 1.160
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number of segments per atom = 32
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number of points per atom = 32
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atom ( nspa, nppa )
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----------------------
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1 ( 20, 0 ) 0
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2 ( 20, 0 ) 0
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3 ( 20, 0 ) 0
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number of -cosmo- surface points = 60
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molecular surface = 31.807 angstrom**2
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molecular volume = 13.219 angstrom**3
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G(cav/disp) = 1.019 kcal/mol
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...... end of -cosmo- initialization ......
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Caching 1-el integrals
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General Information
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-------------------
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SCF calculation type: DFT
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Wavefunction type: closed shell.
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No. of atoms : 3
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No. of electrons : 10
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Alpha electrons : 5
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Beta electrons : 5
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Charge : 0
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Spin multiplicity: 1
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Use of symmetry is: off; symmetry adaption is: off
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Maximum number of iterations: 30
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AO basis - number of functions: 25
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number of shells: 12
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Convergence on energy requested: 1.00D-06
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Convergence on density requested: 1.00D-05
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Convergence on gradient requested: 5.00D-04
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XC Information
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--------------
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Slater Exchange Functional 1.000 local
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VWN V Correlation Functional 1.000 local
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Grid Information
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----------------
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Grid used for XC integration: medium
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Radial quadrature: Mura-Knowles
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Angular quadrature: Lebedev.
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Tag B.-S. Rad. Rad. Pts. Rad. Cut. Ang. Pts.
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--- ---------- --------- --------- ---------
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OW 0.60 49 5.0 434
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HW 0.35 45 6.0 434
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H 0.35 45 6.0 434
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Grid pruning is: on
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Number of quadrature shells: 139
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Spatial weights used: Erf1
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Convergence Information
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-----------------------
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Convergence aids based upon iterative change in
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total energy or number of iterations.
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Levelshifting, if invoked, occurs when the
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HOMO/LUMO gap drops below (HL_TOL): 1.00D-02
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DIIS, if invoked, will attempt to extrapolate
|
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using up to (NFOCK): 10 stored Fock matrices.
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|
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Damping( 0%) Levelshifting(0.5) DIIS
|
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--------------- ------------------- ---------------
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dE on: start ASAP start
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dE off: 2 iters 30 iters 30 iters
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|
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|
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Screening Tolerance Information
|
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-------------------------------
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Density screening/tol_rho: 1.00D-10
|
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AO Gaussian exp screening on grid/accAOfunc: 14
|
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CD Gaussian exp screening on grid/accCDfunc: 20
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XC Gaussian exp screening on grid/accXCfunc: 20
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Schwarz screening/accCoul: 1.00D-08
|
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|
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|
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Superposition of Atomic Density Guess
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-------------------------------------
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|
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Sum of atomic energies: -75.75081731
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|
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Non-variational initial energy
|
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------------------------------
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|
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Total energy = -75.937479
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1-e energy = -121.880910
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2-e energy = 36.655964
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HOMO = -0.474852
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LUMO = 0.117559
|
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|
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Time after variat. SCF: 1.8
|
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Time prior to 1st pass: 1.8
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||||
|
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#quartets = 3.081D+03 #integrals = 2.937D+04 #direct = 0.0% #cached =100.0%
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|
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|
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Integral file = ./data/cosmo_params.aoints.00
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Record size in doubles = 65536 No. of integs per rec = 43688
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Max. records in memory = 2 Max. records in file = 5383208
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No. of bits per label = 8 No. of bits per value = 64
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||||
|
||||
|
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File balance: exchanges= 0 moved= 0 time= 0.0
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|
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|
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Grid_pts file = ./data/cosmo_params.gridpts.00
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Record size in doubles = 12289 No. of grid_pts per rec = 3070
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Max. records in memory = 2 Max. recs in file = 49926882
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|
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|
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Memory utilization after 1st SCF pass:
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Heap Space remaining (MW): 12.95 12949633
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Stack Space remaining (MW): 13.11 13106954
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|
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convergence iter energy DeltaE RMS-Dens Diis-err time
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---------------- ----- ----------------- --------- --------- --------- ------
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COSMO gas phase
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d= 0,ls=0.0,diis 1 -75.8164858642 -8.51D+01 3.49D-02 5.66D-01 3.2
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d= 0,ls=0.0,diis 2 -75.7843104223 3.22D-02 2.22D-02 7.75D-01 3.3
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d= 0,ls=0.0,diis 3 -75.8492469513 -6.49D-02 3.95D-03 5.32D-02 3.3
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d= 0,ls=0.0,diis 4 -75.8538046105 -4.56D-03 4.31D-04 4.13D-04 3.3
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d= 0,ls=0.0,diis 5 -75.8538459506 -4.13D-05 3.02D-05 3.92D-07 3.3
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d= 0,ls=0.0,diis 6 -75.8538460025 -5.19D-08 3.86D-06 3.23D-08 3.3
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setting custom COSMO radius based on element match: O O 1.400
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setting custom COSMO radius based on name match: HW 1.060
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setting custom COSMO radius based on name match: H 1.160
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|
||||
Memory utilization after 1st SCF pass:
|
||||
Heap Space remaining (MW): 12.95 12949369
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Stack Space remaining (MW): 13.11 13106954
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||||
|
||||
convergence iter energy DeltaE RMS-Dens Diis-err time
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---------------- ----- ----------------- --------- --------- --------- ------
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COSMO solvation phase
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d= 0,ls=0.0,diis 1 -75.8699783756 -1.61D-02 7.33D-03 1.21D-02 3.3
|
||||
setting custom COSMO radius based on element match: O O 1.400
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||||
setting custom COSMO radius based on name match: HW 1.060
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||||
setting custom COSMO radius based on name match: H 1.160
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||||
d= 0,ls=0.0,diis 2 -75.8721334716 -2.16D-03 2.14D-03 7.81D-03 3.3
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||||
setting custom COSMO radius based on element match: O O 1.400
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||||
setting custom COSMO radius based on name match: HW 1.060
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||||
setting custom COSMO radius based on name match: H 1.160
|
||||
d= 0,ls=0.0,diis 3 -75.8726385243 -5.05D-04 8.42D-04 2.10D-03 3.3
|
||||
setting custom COSMO radius based on element match: O O 1.400
|
||||
setting custom COSMO radius based on name match: HW 1.060
|
||||
setting custom COSMO radius based on name match: H 1.160
|
||||
d= 0,ls=0.0,diis 4 -75.8728123199 -1.74D-04 6.82D-05 1.73D-05 3.4
|
||||
setting custom COSMO radius based on element match: O O 1.400
|
||||
setting custom COSMO radius based on name match: HW 1.060
|
||||
setting custom COSMO radius based on name match: H 1.160
|
||||
d= 0,ls=0.0,diis 5 -75.8728138553 -1.54D-06 8.36D-06 1.61D-07 3.4
|
||||
setting custom COSMO radius based on element match: O O 1.400
|
||||
setting custom COSMO radius based on name match: HW 1.060
|
||||
setting custom COSMO radius based on name match: H 1.160
|
||||
d= 0,ls=0.0,diis 6 -75.8728138708 -1.56D-08 6.51D-07 6.41D-10 3.4
|
||||
|
||||
|
||||
Total DFT energy = -75.872813870839
|
||||
One electron energy = -123.559347252553
|
||||
Coulomb energy = 47.020872443395
|
||||
Exchange-Corr. energy = -8.792182736851
|
||||
Nuclear repulsion energy = 9.287466837077
|
||||
|
||||
Numeric. integr. density = 10.000001347213
|
||||
|
||||
Total iterative time = 1.6s
|
||||
|
||||
|
||||
COSMO solvation results
|
||||
-----------------------
|
||||
|
||||
gas phase energy = -75.8538460025
|
||||
sol phase energy = -75.8728138708
|
||||
(electrostatic) solvation energy = 0.0189678683 ( 11.90 kcal/mol)
|
||||
|
||||
DFT Final Molecular Orbital Analysis
|
||||
------------------------------------
|
||||
|
||||
Vector 1 Occ=2.000000D+00 E=-1.860234D+01
|
||||
MO Center= -7.9D-07, -5.0D-18, -4.9D-02, r^2= 1.5D-02
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
1 0.990617 1 O s
|
||||
|
||||
Vector 2 Occ=2.000000D+00 E=-9.061195D-01
|
||||
MO Center= -2.7D-03, 1.6D-16, 1.5D-01, r^2= 5.0D-01
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
2 0.456357 1 O s 6 0.435475 1 O s
|
||||
1 -0.212940 1 O s 21 0.151047 3 H s
|
||||
|
||||
Vector 3 Occ=2.000000D+00 E=-4.670142D-01
|
||||
MO Center= -3.2D-04, -3.3D-17, 1.5D-01, r^2= 7.5D-01
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
3 0.528469 1 O px 7 0.268942 1 O px
|
||||
21 -0.232163 3 H s 16 0.230082 2 H s
|
||||
|
||||
Vector 4 Occ=2.000000D+00 E=-3.247858D-01
|
||||
MO Center= -8.5D-04, -3.3D-17, -1.5D-01, r^2= 6.6D-01
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
5 0.561903 1 O pz 9 0.396509 1 O pz
|
||||
6 -0.385899 1 O s
|
||||
|
||||
Vector 5 Occ=2.000000D+00 E=-2.487064D-01
|
||||
MO Center= -2.6D-04, 1.2D-17, -2.7D-02, r^2= 6.1D-01
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
4 0.632243 1 O py 8 0.508009 1 O py
|
||||
|
||||
Vector 6 Occ=0.000000D+00 E= 7.324694D-02
|
||||
MO Center= -6.4D-02, -1.3D-16, 6.7D-01, r^2= 2.4D+00
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
6 1.183701 1 O s 22 -0.993603 3 H s
|
||||
17 -0.908113 2 H s 9 0.430155 1 O pz
|
||||
5 0.251477 1 O pz 2 0.179535 1 O s
|
||||
|
||||
Vector 7 Occ=0.000000D+00 E= 1.594782D-01
|
||||
MO Center= 6.6D-02, -1.0D-17, 6.2D-01, r^2= 2.4D+00
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
17 1.293854 2 H s 22 -1.228750 3 H s
|
||||
7 -0.711388 1 O px 3 -0.428917 1 O px
|
||||
|
||||
Vector 8 Occ=0.000000D+00 E= 7.389204D-01
|
||||
MO Center= -1.4D-01, -1.5D-15, 2.5D-01, r^2= 1.6D+00
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
21 0.813387 3 H s 22 -0.763027 3 H s
|
||||
16 -0.716181 2 H s 17 0.651827 2 H s
|
||||
12 -0.468055 1 O dxz 7 0.317369 1 O px
|
||||
|
||||
Vector 9 Occ=0.000000D+00 E= 7.481636D-01
|
||||
MO Center= 1.3D-01, 4.6D-15, -2.3D-01, r^2= 1.3D+00
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
9 -0.820966 1 O pz 5 0.798774 1 O pz
|
||||
17 0.449260 2 H s 6 0.418069 1 O s
|
||||
16 -0.398555 2 H s 10 -0.327686 1 O dxx
|
||||
2 -0.290686 1 O s 22 0.264777 3 H s
|
||||
15 -0.194885 1 O dzz 21 -0.192060 3 H s
|
||||
|
||||
Vector 10 Occ=0.000000D+00 E= 8.075162D-01
|
||||
MO Center= -3.0D-04, -2.2D-15, -4.9D-02, r^2= 1.1D+00
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
8 -1.036875 1 O py 4 0.966784 1 O py
|
||||
|
||||
Vector 11 Occ=0.000000D+00 E= 8.421375D-01
|
||||
MO Center= -1.7D-03, -1.0D-16, 2.8D-01, r^2= 1.6D+00
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
6 1.140256 1 O s 16 0.712005 2 H s
|
||||
2 -0.701460 1 O s 21 0.691485 3 H s
|
||||
22 -0.576478 3 H s 17 -0.570804 2 H s
|
||||
9 -0.541952 1 O pz 13 -0.328926 1 O dyy
|
||||
5 0.245105 1 O pz 15 -0.183658 1 O dzz
|
||||
|
||||
Vector 12 Occ=0.000000D+00 E= 9.476576D-01
|
||||
MO Center= 7.2D-03, 5.6D-16, 2.5D-02, r^2= 1.8D+00
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
7 1.828840 1 O px 17 -1.106215 2 H s
|
||||
22 1.100502 3 H s 3 -0.864736 1 O px
|
||||
12 0.202216 1 O dxz
|
||||
|
||||
Vector 13 Occ=0.000000D+00 E= 1.121642D+00
|
||||
MO Center= 3.4D-03, -2.1D-16, 4.5D-01, r^2= 1.5D+00
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
6 3.637397 1 O s 2 -1.468393 1 O s
|
||||
9 0.979082 1 O pz 17 -0.859805 2 H s
|
||||
22 -0.848799 3 H s 10 -0.612205 1 O dxx
|
||||
5 -0.346969 1 O pz 15 -0.333957 1 O dzz
|
||||
13 -0.283439 1 O dyy 16 -0.269336 2 H s
|
||||
|
||||
Vector 14 Occ=0.000000D+00 E= 1.458757D+00
|
||||
MO Center= -4.6D-03, -2.6D-16, 1.8D-01, r^2= 7.6D-01
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
11 1.196567 1 O dxy 24 -0.339023 3 H py
|
||||
19 0.331528 2 H py
|
||||
|
||||
Vector 15 Occ=0.000000D+00 E= 1.475958D+00
|
||||
MO Center= -9.8D-04, -1.0D-16, 3.8D-02, r^2= 8.1D-01
|
||||
Bfn. Coefficient Atom+Function Bfn. Coefficient Atom+Function
|
||||
----- ------------ --------------- ----- ------------ ---------------
|
||||
6 0.879393 1 O s 15 -0.806768 1 O dzz
|
||||
9 0.475107 1 O pz 2 -0.314149 1 O s
|
||||
13 0.279034 1 O dyy 10 0.248893 1 O dxx
|
||||
25 -0.243270 3 H pz 20 -0.240643 2 H pz
|
||||
16 -0.227736 2 H s 21 -0.226168 3 H s
|
||||
|
||||
|
||||
center of mass
|
||||
--------------
|
||||
x = 0.00000000 y = 0.00000000 z = 0.02931789
|
||||
|
||||
moments of inertia (a.u.)
|
||||
------------------
|
||||
2.098117097590 0.000000000000 0.000000000000
|
||||
0.000000000000 6.196445222521 0.000000000000
|
||||
0.000000000000 0.000000000000 4.098328124931
|
||||
|
||||
Multipole analysis of the density
|
||||
---------------------------------
|
||||
|
||||
L x y z total alpha beta nuclear
|
||||
- - - - ----- ----- ---- -------
|
||||
0 0 0 0 -0.000000 -5.000000 -5.000000 10.000000
|
||||
|
||||
1 1 0 0 0.015605 0.007802 0.007802 0.000000
|
||||
1 0 1 0 -0.000000 -0.000000 -0.000000 0.000000
|
||||
1 0 0 1 0.985629 -0.130593 -0.130593 1.246815
|
||||
|
||||
2 2 0 0 -2.964483 -3.515496 -3.515496 4.066508
|
||||
2 1 1 0 -0.000000 -0.000000 -0.000000 0.000000
|
||||
2 1 0 1 0.013520 0.006760 0.006760 0.000000
|
||||
2 0 2 0 -5.342584 -2.671292 -2.671292 0.000000
|
||||
2 0 1 1 0.000000 0.000000 0.000000 0.000000
|
||||
2 0 0 2 -4.204034 -3.117414 -3.117414 2.030795
|
||||
|
||||
|
||||
Parallel integral file used 64 records with 0 large values
|
||||
|
||||
|
||||
Task times cpu: 2.1s wall: 8.9s
|
||||
|
||||
|
||||
NWChem Input Module
|
||||
-------------------
|
||||
|
||||
|
||||
Summary of allocated global arrays
|
||||
-----------------------------------
|
||||
No active global arrays
|
||||
|
||||
|
||||
|
||||
GA Statistics for process 0
|
||||
------------------------------
|
||||
|
||||
create destroy get put acc scatter gather read&inc
|
||||
calls: 226 226 902 262 203 0 0 9
|
||||
number of processes/call 3.15e+00 2.47e+00 6.33e+00 0.00e+00 0.00e+00
|
||||
bytes total: 1.63e+06 4.03e+05 6.98e+05 0.00e+00 0.00e+00 7.20e+01
|
||||
bytes remote: 9.17e+05 1.25e+05 4.51e+05 0.00e+00 0.00e+00 0.00e+00
|
||||
Max memory consumed for GA by this process: 72200 bytes
|
||||
|
||||
MA_summarize_allocated_blocks: starting scan ...
|
||||
MA_summarize_allocated_blocks: scan completed: 0 heap blocks, 0 stack blocks
|
||||
MA usage statistics:
|
||||
|
||||
allocation statistics:
|
||||
heap stack
|
||||
---- -----
|
||||
current number of blocks 0 0
|
||||
maximum number of blocks 27 45
|
||||
current total bytes 0 0
|
||||
maximum total bytes 1262528 22510568
|
||||
maximum total K-bytes 1263 22511
|
||||
maximum total M-bytes 2 23
|
||||
|
||||
|
||||
CITATION
|
||||
--------
|
||||
Please cite the following reference when publishing
|
||||
results obtained with NWChem:
|
||||
|
||||
M. Valiev, E.J. Bylaska, N. Govind, K. Kowalski,
|
||||
T.P. Straatsma, H.J.J. van Dam, D. Wang, J. Nieplocha,
|
||||
E. Apra, T.L. Windus, W.A. de Jong
|
||||
"NWChem: a comprehensive and scalable open-source
|
||||
solution for large scale molecular simulations"
|
||||
Comput. Phys. Commun. 181, 1477 (2010)
|
||||
doi:10.1016/j.cpc.2010.04.018
|
||||
|
||||
AUTHORS & CONTRIBUTORS
|
||||
----------------------
|
||||
E. Apra, E. J. Bylaska, W. A. de Jong, N. Govind, K. Kowalski,
|
||||
T. P. Straatsma, M. Valiev, H. J. J. van Dam, D. Wang, T. L. Windus,
|
||||
J. Hammond, J. Autschbach, K. Bhaskaran-Nair, J. Brabec, K. Lopata,
|
||||
F. Aquino, S. Hirata, M. T. Hackler, T. Risthaus, M. Malagoli,J. Mullin,
|
||||
P. Nichols, R. Peverati, J. Pittner, Y. Zhao, P.-D. Fan, A. Fonari,
|
||||
R. J. Harrison, M. Dupuis, D. Silverstein, D. M. A. Smith, J. Nieplocha,
|
||||
V. Tipparaju, M. Krishnan, B. E. Van Kuiken, A. Vazquez-Mayagoitia,
|
||||
L. Jensen, M. Swart, Q. Wu, T. Van Voorhis, A. A. Auer, M. Nooijen,
|
||||
L. D. Crosby, E. Brown, G. Cisneros, G. I. Fann, H. Fruchtl, J. Garza,
|
||||
K. Hirao, R. Kendall, J. A. Nichols, K. Tsemekhman, K. Wolinski, J. Anchell,
|
||||
D. Bernholdt, P. Borowski, T. Clark, D. Clerc, H. Dachsel, M. Deegan,
|
||||
K. Dyall, D. Elwood, E. Glendening, M. Gutowski, A. Hess, J. Jaffe,
|
||||
B. Johnson, J. Ju, R. Kobayashi, R. Kutteh, Z. Lin, R. Littlefield, X. Long,
|
||||
B. Meng, T. Nakajima, S. Niu, L. Pollack, M. Rosing, K. Glaesemann,
|
||||
G. Sandrone, M. Stave, H. Taylor, G. Thomas, J. H. van Lenthe, A. Wong,
|
||||
Z. Zhang.
|
||||
|
||||
Total times cpu: 3.4s wall: 14.7s
|
||||
5
QA/tests/cosmo_params/marat.par
Normal file
5
QA/tests/cosmo_params/marat.par
Normal file
|
|
@ -0,0 +1,5 @@
|
|||
N 2.126
|
||||
HW 1.06
|
||||
H 1.16
|
||||
O 1.4
|
||||
C 1.635
|
||||
Loading…
Add table
Add a link
Reference in a new issue