NWChem/QA/tests/sad_ch3hf/sad_ch3hf.out
Huub Van Dam 97f303e6f8 HvD: In the CVS era the $Id: $ tags in the source code files would
automatically be expanded to include useful information about the
checkin (including the file's revision number). With the switch over
to SVN this was lost because SVN only does this expansion if you 
explicitly ask for it (for every single file). 

I have added a script to the contrib directory that sets the appropriate
property to get SVN to do this expansion. This script will make it easy
to do this every time new source files are added. It is called
svn_expand_Id, the script contains some comments that explain the issue
and how it addresses this.  

This checkin sets this property for a subset of the relevant files
(trying to commit all files at once failed with svn crashing). 
In future the script will only affect those files for which the property
was not set before.
2010-10-29 18:04:21 +00:00

1429 lines
63 KiB
Text

argument 1 = sad_ch3hf.nw
============================== echo of input deck ==============================
echo
start ch3hf
# $Id$
title "Find the saddle point for CH3 + HF <-> CH4 + F"
geometry autosym
c 0.000 0.000 -1.220
h 0.000 0.000 0.029
h 1.063 0.000 -1.407
h -0.531 -0.921 -1.407
h -0.531 0.921 -1.407
f 0.000 0.000 1.279
end
basis
c library 3-21g; h library 3-21g; f library 3-21g
end
scf; doublet; uhf; thresh 1e-6; print none; end
task scf saddle
================================================================================
Northwest Computational Chemistry Package (NWChem) 6.0
------------------------------------------------------
Environmental Molecular Sciences Laboratory
Pacific Northwest National Laboratory
Richland, WA 99352
Copyright (c) 1994-2010
Pacific Northwest National Laboratory
Battelle Memorial Institute
NWChem is an open-source computational chemistry package
distributed under the terms of the
Educational Community License (ECL) 2.0
A copy of the license is included with this distribution
in the LICENSE.TXT file
ACKNOWLEDGMENT
--------------
This software and its documentation were developed at the
EMSL at Pacific Northwest National Laboratory, a multiprogram
national laboratory, operated for the U.S. Department of Energy
by Battelle under Contract Number DE-AC05-76RL01830. Support
for this work was provided by the Department of Energy Office
of Biological and Environmental Research, Office of Basic
Energy Sciences, and the Office of Advanced Scientific Computing.
Job information
---------------
hostname = arcen
program = /home/d3y133/nwchem-releases/nwchem-merge/nwchem-dev/QA/../bin/LINUX64/nwchem
date = Mon Oct 25 15:28:49 2010
compiled = Mon_Oct_25_14:31:37_2010
source = /home/d3y133/nwchem-releases/nwchem-merge/nwchem-dev
nwchem branch = Development
input = sad_ch3hf.nw
prefix = ch3hf.
data base = /home/d3y133/nwchem-releases/nwchem-merge/nwchem-dev/QA/scratchdir/ch3hf.db
status = startup
nproc = 4
time left = -1s
Memory information
------------------
heap = 16384001 doubles = 125.0 Mbytes
stack = 16384001 doubles = 125.0 Mbytes
global = 32768000 doubles = 250.0 Mbytes (distinct from heap & stack)
total = 65536002 doubles = 500.0 Mbytes
verify = yes
hardfail = no
Directory information
---------------------
0 permanent = /home/d3y133/nwchem-releases/nwchem-merge/nwchem-dev/QA/scratchdir
0 scratch = /home/d3y133/nwchem-releases/nwchem-merge/nwchem-dev/QA/scratchdir
NWChem Input Module
-------------------
Find the saddle point for CH3 + HF <-> CH4 + F
----------------------------------------------
Scaling coordinates for geometry "geometry" by 1.889725989
(inverse scale = 0.529177249)
C3V symmetry detected
------
auto-z
------
autoz: The atoms group into disjoint clusters
cluster 1: 1 2 3 4 5
cluster 2: 6
Connecting clusters 1 2 via atoms 2 6 r = 1.25
autoz: regenerating connections with new bonds
Looking for out-of-plane bends
Geometry "geometry" -> ""
-------------------------
Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
No. Tag Charge X Y Z
---- ---------------- ---------- -------------- -------------- --------------
1 c 6.0000 0.00000000 0.00000000 1.21994737
2 h 1.0000 0.00000000 0.00000000 -0.02905263
3 h 1.0000 -0.75170608 -0.75170608 1.40694738
4 h 1.0000 1.02684960 -0.27514352 1.40694738
5 h 1.0000 -0.27514352 1.02684960 1.40694738
6 f 9.0000 0.00000000 0.00000000 -1.27905263
Atomic Mass
-----------
c 12.000000
h 1.007825
f 18.998400
Effective nuclear repulsion energy (a.u.) 33.3083049854
Nuclear Dipole moment (a.u.)
----------------------------
X Y Z
---------------- ---------------- ----------------
0.0000000000 0.0000000000 0.0000000000
Symmetry information
--------------------
Group name C3v
Group number 17
Group order 6
No. of unique centers 4
Symmetry unique atoms
1 2 3 6
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value
----------- -------- ----- ----- ----- ----- ----- ----------
1 Stretch 1 2 1.24900
2 Stretch 1 3 1.07939
3 Stretch 1 4 1.07939
4 Stretch 1 5 1.07939
5 Stretch 2 6 1.25000
6 Bend 2 1 3 99.97656
7 Bend 2 1 4 99.97656
8 Bend 2 1 5 99.97656
9 Bend 3 1 4 117.06359
10 Bend 3 1 5 117.06359
11 Bend 4 1 5 117.06359
12 Bend 6 1 3 99.97656
13 Bend 6 1 4 99.97656
14 Bend 6 1 5 99.97656
15 Torsion 1 3 2 6 180.00000
16 Torsion 1 4 2 6 180.00000
17 Torsion 1 5 2 6 -180.00000
XYZ format geometry
-------------------
6
geometry
c 0.00000000 0.00000000 1.21994737
h 0.00000000 0.00000000 -0.02905263
h -0.75170608 -0.75170608 1.40694738
h 1.02684960 -0.27514352 1.40694738
h -0.27514352 1.02684960 1.40694738
f 0.00000000 0.00000000 -1.27905263
==============================================================================
internuclear distances
------------------------------------------------------------------------------
center one | center two | atomic units | angstroms
------------------------------------------------------------------------------
3 h | 1 c | 2.03976 | 1.07939
4 h | 1 c | 2.03976 | 1.07939
5 h | 1 c | 2.03976 | 1.07939
------------------------------------------------------------------------------
number of included internuclear distances: 3
==============================================================================
==============================================================================
internuclear angles
------------------------------------------------------------------------------
center 1 | center 2 | center 3 | degrees
------------------------------------------------------------------------------
3 h | 1 c | 4 h | 117.06
3 h | 1 c | 5 h | 117.06
4 h | 1 c | 5 h | 117.06
------------------------------------------------------------------------------
number of included internuclear angles: 3
==============================================================================
library name resolved from: .nwchemrc
library file name is: </home/d3y133/nwchem-releases/nwchem-merge/nwchem-dev/QA/../src/basis/libraries/>
Basis "ao basis" -> "" (cartesian)
-----
c (Carbon)
----------
Exponent Coefficients
-------------- ---------------------------------------------------------
1 S 1.72256000E+02 0.061767
1 S 2.59109000E+01 0.358794
1 S 5.53335000E+00 0.700713
2 S 3.66498000E+00 -0.395897
2 S 7.70545000E-01 1.215840
3 P 3.66498000E+00 0.236460
3 P 7.70545000E-01 0.860619
4 S 1.95857000E-01 1.000000
5 P 1.95857000E-01 1.000000
h (Hydrogen)
------------
Exponent Coefficients
-------------- ---------------------------------------------------------
1 S 5.44717800E+00 0.156285
1 S 8.24547000E-01 0.904691
2 S 1.83192000E-01 1.000000
f (Fluorine)
------------
Exponent Coefficients
-------------- ---------------------------------------------------------
1 S 4.13801000E+02 0.058548
1 S 6.22446000E+01 0.349308
1 S 1.34340000E+01 0.709632
2 S 9.77759000E+00 -0.407327
2 S 2.08617000E+00 1.223140
3 P 9.77759000E+00 0.246680
3 P 2.08617000E+00 0.852321
4 S 4.82383000E-01 1.000000
5 P 4.82383000E-01 1.000000
Summary of "ao basis" -> "" (cartesian)
------------------------------------------------------------------------------
Tag Description Shells Functions and Types
---------------- ------------------------------ ------ ---------------------
c 3-21g 5 9 3s2p
h 3-21g 2 2 2s
f 3-21g 5 9 3s2p
NWChem Geometry Optimization
----------------------------
Find the saddle point for CH3 + HF <-> CH4 + F
maximum gradient threshold (gmax) = 0.000450
rms gradient threshold (grms) = 0.000300
maximum cartesian step threshold (xmax) = 0.001800
rms cartesian step threshold (xrms) = 0.001200
fixed trust radius (trust) = 0.100000
maximum step size to saddle (sadstp) = 0.100000
energy precision (eprec) = 1.0D-07
maximum number of steps (nptopt) = 20
initial hessian option (inhess) = 0
line search option (linopt) = 0
hessian update option (modupd) = 2
saddle point option (modsad) = 1
initial eigen-mode to follow (moddir) = 0
initial variable to follow (vardir) = 0
follow first negative mode (firstneg) = T
apply conjugacy (opcg) = F
source of zmatrix = autoz
-----------------------
Transition State Search
-----------------------
Names of Z-matrix variables
1 2 3 4 5
6 7 8 9 10
11 12 13 14 15
16 17
Variables with the same non-blank name are constrained to be equal
Using diagonal initial Hessian
Scaling for Hessian diagonals: bonds = 1.00 angles = 0.25 torsions = 0.10
--------
Step 0
--------
Geometry "geometry" -> "geometry"
---------------------------------
Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
No. Tag Charge X Y Z
---- ---------------- ---------- -------------- -------------- --------------
1 c 6.0000 0.00000000 0.00000000 1.21994737
2 h 1.0000 0.00000000 0.00000000 -0.02905263
3 h 1.0000 -0.75170608 -0.75170608 1.40694738
4 h 1.0000 1.02684960 -0.27514352 1.40694738
5 h 1.0000 -0.27514352 1.02684960 1.40694738
6 f 9.0000 0.00000000 0.00000000 -1.27905263
Atomic Mass
-----------
c 12.000000
h 1.007825
f 18.998400
Effective nuclear repulsion energy (a.u.) 33.3083049854
Nuclear Dipole moment (a.u.)
----------------------------
X Y Z
---------------- ---------------- ----------------
0.0000000000 0.0000000000 0.0000000000
Symmetry information
--------------------
Group name C3v
Group number 17
Group order 6
No. of unique centers 4
Symmetry unique atoms
1 2 3 6
@ Step Energy Delta E Gmax Grms Xrms Xmax Walltime
@ ---- ---------------- -------- -------- -------- -------- -------- --------
@ 0 -138.77951200 0.0D+00 0.01611 0.00622 0.00000 0.00000 0.5
ok ok
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Gradient
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.24900 0.01263
2 Stretch 1 3 1.07939 0.00197
3 Stretch 1 4 1.07939 0.00197
4 Stretch 1 5 1.07939 0.00197
5 Stretch 2 6 1.25000 -0.01611
6 Bend 2 1 3 99.97656 -0.00571
7 Bend 2 1 4 99.97656 -0.00571
8 Bend 2 1 5 99.97656 -0.00571
9 Bend 3 1 4 117.06359 0.00328
10 Bend 3 1 5 117.06359 0.00328
11 Bend 4 1 5 117.06359 0.00328
12 Bend 6 1 3 99.97656 -0.00571
13 Bend 6 1 4 99.97656 -0.00571
14 Bend 6 1 5 99.97656 -0.00571
15 Torsion 1 3 2 6 180.00000 0.00000
16 Torsion 1 4 2 6 180.00000 0.00000
17 Torsion 1 5 2 6 -180.00000 0.00000
Hessian eigenvalues: positive= 17 negative= 0 zero= 0
Initial step taken uphill
The mode being followed to the saddle point
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Sadmode
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.24900 0.49667
2 Stretch 1 3 1.07939 0.00000
3 Stretch 1 4 1.07939 0.00000
4 Stretch 1 5 1.07939 0.00000
5 Stretch 2 6 1.25000 -0.63339
6 Bend 2 1 3 99.97656 -0.22443
7 Bend 2 1 4 99.97656 -0.22443
8 Bend 2 1 5 99.97656 -0.22443
9 Bend 3 1 4 117.06359 0.12900
10 Bend 3 1 5 117.06359 0.12900
11 Bend 4 1 5 117.06359 0.12900
12 Bend 6 1 3 99.97656 -0.22443
13 Bend 6 1 4 99.97656 -0.22443
14 Bend 6 1 5 99.97656 -0.22443
15 Torsion 1 3 2 6 180.00000 0.00000
16 Torsion 1 4 2 6 180.00000 0.00000
17 Torsion 1 5 2 6 -180.00000 0.00000
--------
Step 1
--------
Geometry "geometry" -> "geometry"
---------------------------------
Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
No. Tag Charge X Y Z
---- ---------------- ---------- -------------- -------------- --------------
1 c 6.0000 0.00000000 0.00000000 1.22236245
2 h 1.0000 0.00000000 0.00000000 -0.03332204
3 h 1.0000 -0.75210247 -0.75210247 1.40614711
4 h 1.0000 1.02739108 -0.27528861 1.40614711
5 h 1.0000 -0.27528861 1.02739108 1.40614711
6 f 9.0000 0.00000000 0.00000000 -1.27479752
Atomic Mass
-----------
c 12.000000
h 1.007825
f 18.998400
Effective nuclear repulsion energy (a.u.) 33.3350607218
Nuclear Dipole moment (a.u.)
----------------------------
X Y Z
---------------- ---------------- ----------------
0.0000000000 0.0000000000 0.0871471421
Symmetry information
--------------------
Group name C3v
Group number 17
Group order 6
No. of unique centers 4
Symmetry unique atoms
1 2 3 6
Step Energy Delta E Gmax Grms Xrms Xmax Walltime
---- ---------------- -------- -------- -------- -------- -------- --------
@ 1 -138.77889531 6.2D-04 0.01374 0.00567 0.00299 0.00807 0.8
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Gradient
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.25568 0.01114
2 Stretch 1 3 1.07939 0.00208
3 Stretch 1 4 1.07939 0.00208
4 Stretch 1 5 1.07939 0.00208
5 Stretch 2 6 1.24148 -0.01374
6 Bend 2 1 3 99.80331 -0.00562
7 Bend 2 1 4 99.80331 -0.00562
8 Bend 2 1 5 99.80331 -0.00562
9 Bend 3 1 4 117.16239 0.00318
10 Bend 3 1 5 117.16239 0.00318
11 Bend 4 1 5 117.16239 0.00318
12 Bend 6 1 3 99.80331 -0.00562
13 Bend 6 1 4 99.80331 -0.00562
14 Bend 6 1 5 99.80331 -0.00562
15 Torsion 1 3 2 6 180.00000 0.00000
16 Torsion 1 4 2 6 180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Hessian eigenvalues: positive= 16 negative= 1 zero= 0
Hessian has correct structure - following negative mode, overlap=-9.6D-01
The mode being followed to the saddle point
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Sadmode
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.25568 -0.53471
2 Stretch 1 3 1.07939 0.00950
3 Stretch 1 4 1.07939 0.00950
4 Stretch 1 5 1.07939 0.00950
5 Stretch 2 6 1.24148 0.76359
6 Bend 2 1 3 99.80331 0.13706
7 Bend 2 1 4 99.80331 0.13706
8 Bend 2 1 5 99.80331 0.13706
9 Bend 3 1 4 117.16239 -0.07754
10 Bend 3 1 5 117.16239 -0.07754
11 Bend 4 1 5 117.16239 -0.07754
12 Bend 6 1 3 99.80331 0.13706
13 Bend 6 1 4 99.80331 0.13706
14 Bend 6 1 5 99.80331 0.13706
15 Torsion 1 3 2 6 180.00000 0.00000
16 Torsion 1 4 2 6 180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Restricting large step in mode 1 eval=-1.1D-01 step=-1.9D-01 new=-1.0D-01
Search mode= 1 eval=-1.1D-01 grad=-2.2D-02 step=-1.0D-01
Restricting overall step due to large component. alpha= 0.99
--------
Step 2
--------
Geometry "geometry" -> "geometry"
---------------------------------
Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
No. Tag Charge X Y Z
---- ---------------- ---------- -------------- -------------- --------------
1 c 6.0000 0.00000000 0.00000000 1.22147357
2 h 1.0000 0.00000000 0.00000000 -0.06469204
3 h 1.0000 -0.74885308 -0.74885308 1.40971750
4 h 1.0000 1.02295233 -0.27409925 1.40971750
5 h 1.0000 -0.27409925 1.02295233 1.40971750
6 f 9.0000 0.00000000 0.00000000 -1.25324980
Atomic Mass
-----------
c 12.000000
h 1.007825
f 18.998400
Effective nuclear repulsion energy (a.u.) 33.6035766616
Nuclear Dipole moment (a.u.)
----------------------------
X Y Z
---------------- ---------------- ----------------
0.0000000000 0.0000000000 0.4045028053
Symmetry information
--------------------
Group name C3v
Group number 17
Group order 6
No. of unique centers 4
Symmetry unique atoms
1 2 3 6
Step Energy Delta E Gmax Grms Xrms Xmax Walltime
---- ---------------- -------- -------- -------- -------- -------- --------
@ 2 -138.77801195 8.8D-04 0.00398 0.00266 0.01754 0.05931 1.1
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Gradient
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.28617 0.00129
2 Stretch 1 3 1.07564 -0.00041
3 Stretch 1 4 1.07564 -0.00041
4 Stretch 1 5 1.07564 -0.00041
5 Stretch 2 6 1.18856 -0.00271
6 Bend 2 1 3 100.07905 -0.00398
7 Bend 2 1 4 100.07905 -0.00398
8 Bend 2 1 5 100.07905 -0.00398
9 Bend 3 1 4 117.00440 0.00231
10 Bend 3 1 5 117.00440 0.00231
11 Bend 4 1 5 117.00440 0.00231
12 Bend 6 1 3 100.07905 -0.00398
13 Bend 6 1 4 100.07905 -0.00398
14 Bend 6 1 5 100.07905 -0.00398
15 Torsion 1 3 2 6 180.00000 0.00000
16 Torsion 1 4 2 6 180.00000 0.00000
17 Torsion 1 5 2 6 -180.00000 0.00000
Hessian eigenvalues: positive= 16 negative= 1 zero= 0
Hessian has correct structure - following negative mode, overlap= 9.7D-01
The mode being followed to the saddle point
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Sadmode
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.28617 -0.57153
2 Stretch 1 3 1.07564 0.00131
3 Stretch 1 4 1.07564 0.00132
4 Stretch 1 5 1.07564 0.00132
5 Stretch 2 6 1.18856 0.81168
6 Bend 2 1 3 100.07905 0.04553
7 Bend 2 1 4 100.07905 0.04553
8 Bend 2 1 5 100.07905 0.04553
9 Bend 3 1 4 117.00440 -0.02642
10 Bend 3 1 5 117.00440 -0.02642
11 Bend 4 1 5 117.00440 -0.02642
12 Bend 6 1 3 100.07905 0.04553
13 Bend 6 1 4 100.07905 0.04553
14 Bend 6 1 5 100.07905 0.04553
15 Torsion 1 3 2 6 180.00000 0.00000
16 Torsion 1 4 2 6 180.00000 0.00000
17 Torsion 1 5 2 6 -180.00000 0.00000
Restricting large step in mode 8 eval= 6.8D-02 step= 1.4D-01 new= 1.0D-01
Search mode= 1 eval=-1.4D-01 grad=-4.2D-03 step=-3.1D-02
--------
Step 3
--------
Geometry "geometry" -> "geometry"
---------------------------------
Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
No. Tag Charge X Y Z
---- ---------------- ---------- -------------- -------------- --------------
1 c 6.0000 0.00000000 0.00000000 1.21179310
2 h 1.0000 0.00000000 0.00000000 -0.08555267
3 h 1.0000 -0.74666712 -0.74666712 1.42023934
4 h 1.0000 1.01996626 -0.27329914 1.42023934
5 h 1.0000 -0.27329914 1.01996626 1.42023934
6 f 9.0000 0.00000000 0.00000000 -1.25427422
Atomic Mass
-----------
c 12.000000
h 1.007825
f 18.998400
Effective nuclear repulsion energy (a.u.) 33.6597791165
Nuclear Dipole moment (a.u.)
----------------------------
X Y Z
---------------- ---------------- ----------------
0.0000000000 0.0000000000 0.2975486231
Symmetry information
--------------------
Group name C3v
Group number 17
Group order 6
No. of unique centers 4
Symmetry unique atoms
1 2 3 6
Step Energy Delta E Gmax Grms Xrms Xmax Walltime
---- ---------------- -------- -------- -------- -------- -------- --------
@ 3 -138.77878590 -7.7D-04 0.00259 0.00170 0.01335 0.03959 1.4
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Gradient
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.29735 -0.00075
2 Stretch 1 3 1.07632 -0.00005
3 Stretch 1 4 1.07632 -0.00005
4 Stretch 1 5 1.07632 -0.00005
5 Stretch 2 6 1.16872 -0.00033
6 Bend 2 1 3 101.16674 -0.00259
7 Bend 2 1 4 101.16674 -0.00259
8 Bend 2 1 5 101.16674 -0.00259
9 Bend 3 1 4 116.34281 0.00165
10 Bend 3 1 5 116.34281 0.00165
11 Bend 4 1 5 116.34281 0.00165
12 Bend 6 1 3 101.16674 -0.00259
13 Bend 6 1 4 101.16674 -0.00259
14 Bend 6 1 5 101.16674 -0.00259
15 Torsion 1 3 2 6 180.00000 0.00000
16 Torsion 1 4 2 6 -180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Hessian eigenvalues: positive= 16 negative= 1 zero= 0
Hessian has correct structure - following negative mode, overlap= 1.0D+00
The mode being followed to the saddle point
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Sadmode
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.29735 -0.57874
2 Stretch 1 3 1.07632 0.00159
3 Stretch 1 4 1.07632 0.00159
4 Stretch 1 5 1.07632 0.00159
5 Stretch 2 6 1.16872 0.80172
6 Bend 2 1 3 101.16674 0.05561
7 Bend 2 1 4 101.16674 0.05561
8 Bend 2 1 5 101.16674 0.05561
9 Bend 3 1 4 116.34281 -0.03537
10 Bend 3 1 5 116.34281 -0.03537
11 Bend 4 1 5 116.34281 -0.03537
12 Bend 6 1 3 101.16674 0.05561
13 Bend 6 1 4 101.16674 0.05561
14 Bend 6 1 5 101.16674 0.05561
15 Torsion 1 3 2 6 180.00000 0.00000
16 Torsion 1 4 2 6 -180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Restricting large step in mode 2 eval= 3.0D-02 step= 2.2D-01 new= 1.0D-01
Search mode= 1 eval=-1.3D-01 grad=-8.7D-04 step=-6.8D-03
--------
Step 4
--------
Geometry "geometry" -> "geometry"
---------------------------------
Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
No. Tag Charge X Y Z
---- ---------------- ---------- -------------- -------------- --------------
1 c 6.0000 0.00000000 0.00000000 1.20247007
2 h 1.0000 0.00000000 0.00000000 -0.10181364
3 h 1.0000 -0.74386046 -0.74386046 1.43115091
4 h 1.0000 1.01613228 -0.27227182 1.43115091
5 h 1.0000 -0.27227182 1.01613228 1.43115091
6 f 9.0000 0.00000000 0.00000000 -1.26142494
Atomic Mass
-----------
c 12.000000
h 1.007825
f 18.998400
Effective nuclear repulsion energy (a.u.) 33.6547212612
Nuclear Dipole moment (a.u.)
----------------------------
X Y Z
---------------- ---------------- ----------------
0.0000000000 0.0000000000 0.1013556004
Symmetry information
--------------------
Group name C3v
Group number 17
Group order 6
No. of unique centers 4
Symmetry unique atoms
1 2 3 6
Step Energy Delta E Gmax Grms Xrms Xmax Walltime
---- ---------------- -------- -------- -------- -------- -------- --------
@ 4 -138.77933061 -5.4D-04 0.00148 0.00099 0.01272 0.03091 2.1
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Gradient
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.30428 -0.00034
2 Stretch 1 3 1.07655 -0.00014
3 Stretch 1 4 1.07655 -0.00014
4 Stretch 1 5 1.07655 -0.00014
5 Stretch 2 6 1.15961 0.00028
6 Bend 2 1 3 102.26426 -0.00148
7 Bend 2 1 4 102.26426 -0.00148
8 Bend 2 1 5 102.26426 -0.00148
9 Bend 3 1 4 115.61463 0.00102
10 Bend 3 1 5 115.61463 0.00102
11 Bend 4 1 5 115.61463 0.00102
12 Bend 6 1 3 102.26426 -0.00148
13 Bend 6 1 4 102.26426 -0.00148
14 Bend 6 1 5 102.26426 -0.00148
15 Torsion 1 3 2 6 -180.00000 0.00000
16 Torsion 1 4 2 6 -180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Hessian eigenvalues: positive= 16 negative= 1 zero= 0
Hessian has correct structure - following negative mode, overlap= 1.0D+00
The mode being followed to the saddle point
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Sadmode
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.30428 -0.57821
2 Stretch 1 3 1.07655 0.00149
3 Stretch 1 4 1.07655 0.00149
4 Stretch 1 5 1.07655 0.00149
5 Stretch 2 6 1.15961 0.79988
6 Bend 2 1 3 102.26426 0.05899
7 Bend 2 1 4 102.26426 0.05899
8 Bend 2 1 5 102.26426 0.05899
9 Bend 3 1 4 115.61463 -0.04074
10 Bend 3 1 5 115.61463 -0.04074
11 Bend 4 1 5 115.61463 -0.04074
12 Bend 6 1 3 102.26426 0.05899
13 Bend 6 1 4 102.26426 0.05899
14 Bend 6 1 5 102.26426 0.05899
15 Torsion 1 3 2 6 -180.00000 0.00000
16 Torsion 1 4 2 6 -180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Restricting large step in mode 2 eval= 2.8D-02 step= 1.4D-01 new= 1.0D-01
Search mode= 1 eval=-1.3D-01 grad=-2.3D-04 step=-1.8D-03
--------
Step 5
--------
Geometry "geometry" -> "geometry"
---------------------------------
Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
No. Tag Charge X Y Z
---- ---------------- ---------- -------------- -------------- --------------
1 c 6.0000 0.00000000 0.00000000 1.19266613
2 h 1.0000 0.00000000 0.00000000 -0.11635257
3 h 1.0000 -0.74104114 -0.74104114 1.44136904
4 h 1.0000 1.01228103 -0.27123988 1.44136904
5 h 1.0000 -0.27123988 1.01228103 1.44136904
6 f 9.0000 0.00000000 0.00000000 -1.26773644
Atomic Mass
-----------
c 12.000000
h 1.007825
f 18.998400
Effective nuclear repulsion energy (a.u.) 33.6584689775
Nuclear Dipole moment (a.u.)
----------------------------
X Y Z
---------------- ---------------- ----------------
0.0000000000 0.0000000000 -0.0866943238
Symmetry information
--------------------
Group name C3v
Group number 17
Group order 6
No. of unique centers 4
Symmetry unique atoms
1 2 3 6
Step Energy Delta E Gmax Grms Xrms Xmax Walltime
---- ---------------- -------- -------- -------- -------- -------- --------
@ 5 -138.77959761 -2.7D-04 0.00046 0.00032 0.01192 0.02765 2.4
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Gradient
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.30902 -0.00007
2 Stretch 1 3 1.07710 -0.00003
3 Stretch 1 4 1.07710 -0.00003
4 Stretch 1 5 1.07710 -0.00003
5 Stretch 2 6 1.15138 0.00025
6 Bend 2 1 3 103.35014 -0.00046
7 Bend 2 1 4 103.35014 -0.00046
8 Bend 2 1 5 103.35014 -0.00046
9 Bend 3 1 4 114.83629 0.00034
10 Bend 3 1 5 114.83629 0.00034
11 Bend 4 1 5 114.83629 0.00034
12 Bend 6 1 3 103.35014 -0.00046
13 Bend 6 1 4 103.35014 -0.00046
14 Bend 6 1 5 103.35014 -0.00046
15 Torsion 1 3 2 6 -180.00000 0.00000
16 Torsion 1 4 2 6 180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Hessian eigenvalues: positive= 16 negative= 1 zero= 0
Hessian has correct structure - following negative mode, overlap= 1.0D+00
The mode being followed to the saddle point
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Sadmode
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.30902 -0.57835
2 Stretch 1 3 1.07710 0.00146
3 Stretch 1 4 1.07710 0.00146
4 Stretch 1 5 1.07710 0.00146
5 Stretch 2 6 1.15138 0.80021
6 Bend 2 1 3 103.35014 0.05735
7 Bend 2 1 4 103.35014 0.05735
8 Bend 2 1 5 103.35014 0.05735
9 Bend 3 1 4 114.83629 -0.04259
10 Bend 3 1 5 114.83629 -0.04259
11 Bend 4 1 5 114.83629 -0.04259
12 Bend 6 1 3 103.35014 0.05735
13 Bend 6 1 4 103.35014 0.05735
14 Bend 6 1 5 103.35014 0.05735
15 Torsion 1 3 2 6 -180.00000 0.00000
16 Torsion 1 4 2 6 180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Search mode= 1 eval=-1.3D-01 grad= 3.6D-05 step= 2.8D-04
--------
Step 6
--------
Geometry "geometry" -> "geometry"
---------------------------------
Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
No. Tag Charge X Y Z
---- ---------------- ---------- -------------- -------------- --------------
1 c 6.0000 0.00000000 0.00000000 1.18785391
2 h 1.0000 0.00000000 0.00000000 -0.12271619
3 h 1.0000 -0.73959653 -0.73959653 1.44600367
4 h 1.0000 1.01030765 -0.27071112 1.44600367
5 h 1.0000 -0.27071112 1.01030765 1.44600367
6 f 9.0000 0.00000000 0.00000000 -1.27046451
Atomic Mass
-----------
c 12.000000
h 1.007825
f 18.998400
Effective nuclear repulsion energy (a.u.) 33.6643582195
Nuclear Dipole moment (a.u.)
----------------------------
X Y Z
---------------- ---------------- ----------------
0.0000000000 0.0000000000 -0.1734055710
Symmetry information
--------------------
Group name C3v
Group number 17
Group order 6
No. of unique centers 4
Symmetry unique atoms
1 2 3 6
Step Energy Delta E Gmax Grms Xrms Xmax Walltime
---- ---------------- -------- -------- -------- -------- -------- --------
@ 6 -138.77962933 -3.2D-05 0.00002 0.00001 0.00543 0.01206 2.6
ok ok
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Gradient
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.31057 0.00001
2 Stretch 1 3 1.07733 -0.00002
3 Stretch 1 4 1.07733 -0.00002
4 Stretch 1 5 1.07733 -0.00002
5 Stretch 2 6 1.14775 0.00002
6 Bend 2 1 3 103.86407 -0.00001
7 Bend 2 1 4 103.86407 -0.00001
8 Bend 2 1 5 103.86407 -0.00001
9 Bend 3 1 4 114.44843 0.00001
10 Bend 3 1 5 114.44843 0.00001
11 Bend 4 1 5 114.44843 0.00001
12 Bend 6 1 3 103.86407 -0.00001
13 Bend 6 1 4 103.86407 -0.00001
14 Bend 6 1 5 103.86407 -0.00001
15 Torsion 1 3 2 6 180.00000 0.00000
16 Torsion 1 4 2 6 180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Hessian eigenvalues: positive= 16 negative= 1 zero= 0
Hessian has correct structure - following negative mode, overlap= 1.0D+00
The mode being followed to the saddle point
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Sadmode
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.31057 -0.57839
2 Stretch 1 3 1.07733 0.00146
3 Stretch 1 4 1.07733 0.00146
4 Stretch 1 5 1.07733 0.00146
5 Stretch 2 6 1.14775 0.80029
6 Bend 2 1 3 103.86407 0.05675
7 Bend 2 1 4 103.86407 0.05675
8 Bend 2 1 5 103.86407 0.05675
9 Bend 3 1 4 114.44843 -0.04351
10 Bend 3 1 5 114.44843 -0.04351
11 Bend 4 1 5 114.44843 -0.04351
12 Bend 6 1 3 103.86407 0.05675
13 Bend 6 1 4 103.86407 0.05675
14 Bend 6 1 5 103.86407 0.05675
15 Torsion 1 3 2 6 180.00000 0.00000
16 Torsion 1 4 2 6 180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Search mode= 1 eval=-1.3D-01 grad= 3.9D-06 step= 3.0D-05
--------
Step 7
--------
Geometry "geometry" -> "geometry"
---------------------------------
Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
No. Tag Charge X Y Z
---- ---------------- ---------- -------------- -------------- --------------
1 c 6.0000 0.00000000 0.00000000 1.18773489
2 h 1.0000 0.00000000 0.00000000 -0.12281684
3 h 1.0000 -0.73958478 -0.73958478 1.44607972
4 h 1.0000 1.01029159 -0.27070682 1.44607972
5 h 1.0000 -0.27070682 1.01029159 1.44607972
6 f 9.0000 0.00000000 0.00000000 -1.27047297
Atomic Mass
-----------
c 12.000000
h 1.007825
f 18.998400
Effective nuclear repulsion energy (a.u.) 33.6648265201
Nuclear Dipole moment (a.u.)
----------------------------
X Y Z
---------------- ---------------- ----------------
0.0000000000 0.0000000000 -0.1746580581
Symmetry information
--------------------
Group name C3v
Group number 17
Group order 6
No. of unique centers 4
Symmetry unique atoms
1 2 3 6
Step Energy Delta E Gmax Grms Xrms Xmax Walltime
---- ---------------- -------- -------- -------- -------- -------- --------
@ 7 -138.77962934 -1.5D-08 0.00001 0.00000 0.00009 0.00022 2.9
ok ok ok ok
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Gradient
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.31055 0.00001
2 Stretch 1 3 1.07736 0.00000
3 Stretch 1 4 1.07736 0.00000
4 Stretch 1 5 1.07736 0.00000
5 Stretch 2 6 1.14766 0.00000
6 Bend 2 1 3 103.87435 0.00000
7 Bend 2 1 4 103.87435 0.00000
8 Bend 2 1 5 103.87435 0.00000
9 Bend 3 1 4 114.44054 0.00000
10 Bend 3 1 5 114.44054 0.00000
11 Bend 4 1 5 114.44054 0.00000
12 Bend 6 1 3 103.87435 0.00000
13 Bend 6 1 4 103.87435 0.00000
14 Bend 6 1 5 103.87435 0.00000
15 Torsion 1 3 2 6 -180.00000 0.00000
16 Torsion 1 4 2 6 -180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
----------------------
Optimization converged
----------------------
Step Energy Delta E Gmax Grms Xrms Xmax Walltime
---- ---------------- -------- -------- -------- -------- -------- --------
@ 7 -138.77962934 -1.5D-08 0.00001 0.00000 0.00009 0.00022 2.9
ok ok ok ok
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Gradient
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.31055 0.00001
2 Stretch 1 3 1.07736 0.00000
3 Stretch 1 4 1.07736 0.00000
4 Stretch 1 5 1.07736 0.00000
5 Stretch 2 6 1.14766 0.00000
6 Bend 2 1 3 103.87435 0.00000
7 Bend 2 1 4 103.87435 0.00000
8 Bend 2 1 5 103.87435 0.00000
9 Bend 3 1 4 114.44054 0.00000
10 Bend 3 1 5 114.44054 0.00000
11 Bend 4 1 5 114.44054 0.00000
12 Bend 6 1 3 103.87435 0.00000
13 Bend 6 1 4 103.87435 0.00000
14 Bend 6 1 5 103.87435 0.00000
15 Torsion 1 3 2 6 -180.00000 0.00000
16 Torsion 1 4 2 6 -180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
Geometry "geometry" -> "geometry"
---------------------------------
Output coordinates in angstroms (scale by 1.889725989 to convert to a.u.)
No. Tag Charge X Y Z
---- ---------------- ---------- -------------- -------------- --------------
1 c 6.0000 0.00000000 0.00000000 1.18773489
2 h 1.0000 0.00000000 0.00000000 -0.12281684
3 h 1.0000 -0.73958478 -0.73958478 1.44607972
4 h 1.0000 1.01029159 -0.27070682 1.44607972
5 h 1.0000 -0.27070682 1.01029159 1.44607972
6 f 9.0000 0.00000000 0.00000000 -1.27047297
Atomic Mass
-----------
c 12.000000
h 1.007825
f 18.998400
Effective nuclear repulsion energy (a.u.) 33.6648265201
Nuclear Dipole moment (a.u.)
----------------------------
X Y Z
---------------- ---------------- ----------------
0.0000000000 0.0000000000 -0.1746580581
Symmetry information
--------------------
Group name C3v
Group number 17
Group order 6
No. of unique centers 4
Symmetry unique atoms
1 2 3 6
Final and change from initial internal coordinates
--------------------------------------------------
Z-matrix (autoz)
--------
Units are Angstrom for bonds and degrees for angles
Type Name I J K L M Value Change
----------- -------- ----- ----- ----- ----- ----- ---------- ----------
1 Stretch 1 2 1.31055 0.06155
2 Stretch 1 3 1.07736 -0.00203
3 Stretch 1 4 1.07736 -0.00203
4 Stretch 1 5 1.07736 -0.00203
5 Stretch 2 6 1.14766 -0.10234
6 Bend 2 1 3 103.87435 3.89779
7 Bend 2 1 4 103.87435 3.89779
8 Bend 2 1 5 103.87435 3.89779
9 Bend 3 1 4 114.44054 -2.62305
10 Bend 3 1 5 114.44054 -2.62305
11 Bend 4 1 5 114.44054 -2.62305
12 Bend 6 1 3 103.87435 3.89779
13 Bend 6 1 4 103.87435 3.89779
14 Bend 6 1 5 103.87435 3.89779
15 Torsion 1 3 2 6 -180.00000 0.00000
16 Torsion 1 4 2 6 -180.00000 0.00000
17 Torsion 1 5 2 6 180.00000 0.00000
==============================================================================
internuclear distances
------------------------------------------------------------------------------
center one | center two | atomic units | angstroms
------------------------------------------------------------------------------
3 h | 1 c | 2.03592 | 1.07736
4 h | 1 c | 2.03592 | 1.07736
5 h | 1 c | 2.03592 | 1.07736
------------------------------------------------------------------------------
number of included internuclear distances: 3
==============================================================================
==============================================================================
internuclear angles
------------------------------------------------------------------------------
center 1 | center 2 | center 3 | degrees
------------------------------------------------------------------------------
3 h | 1 c | 4 h | 114.44
3 h | 1 c | 5 h | 114.44
4 h | 1 c | 5 h | 114.44
------------------------------------------------------------------------------
number of included internuclear angles: 3
==============================================================================
Task times cpu: 1.9s wall: 2.8s
Summary of allocated global arrays
-----------------------------------
No active global arrays
GA Statistics for process 0
------------------------------
create destroy get put acc scatter gather read&inc
calls: 6874 6874 6.18e+04 8313 3.81e+04 937 0 6091
number of processes/call 1.14e+00 1.41e+00 1.14e+00 1.70e+00 0.00e+00
bytes total: 2.52e+07 8.72e+06 8.81e+06 1.97e+05 0.00e+00 4.87e+04
bytes remote: 9.78e+06 3.06e+06 5.93e+06 -2.58e+05 0.00e+00 0.00e+00
Max memory consumed for GA by this process: 58880 bytes
MA_summarize_allocated_blocks: starting scan ...
MA_summarize_allocated_blocks: scan completed: 0 heap blocks, 0 stack blocks
MA usage statistics:
allocation statistics:
heap stack
---- -----
current number of blocks 0 0
maximum number of blocks 20 33
current total bytes 0 0
maximum total bytes 1060248 22510200
maximum total K-bytes 1061 22511
maximum total M-bytes 2 23
NWChem Input Module
-------------------
CITATION
--------
Please cite the following reference when publishing
results obtained with NWChem:
M. Valiev, E.J. Bylaska, N. Govind, K. Kowalski,
T.P. Straatsma, H.J.J. van Dam, D. Wang, J. Nieplocha,
E. Apra, T.L. Windus, W.A. de Jong
"NWChem: a comprehensive and scalable open-source
solution for large scale molecular simulations"
Comput. Phys. Commun. 181, 1477 (2010)
doi:10.1016/j.cpc.2010.04.018
AUTHORS & CONTRIBUTORS
----------------------
E. J. Bylaska, W. A. de Jong, N. Govind, K. Kowalski, T. P. Straatsma,
M. Valiev, H. J. J. van Dam, D. Wang, E. Apra, T. L. Windus, J. Hammond,
J. Autschbach, P. Nichols, S. Hirata, M. T. Hackler, Y. Zhao, P.-D. Fan,
R. J. Harrison, M. Dupuis, D. M. A. Smith, K. Glaesemann, J. Nieplocha,
V. Tipparaju, M. Krishnan, A. Vazquez-Mayagoitia, L. Jensen, M. Swart,
Q. Wu, T. Van Voorhis, A. A. Auer, M. Nooijen, L. D. Crosby, E. Brown,
G. Cisneros, G. I. Fann, H. Fruchtl, J. Garza, K. Hirao,
R. Kendall, J. A. Nichols, K. Tsemekhman, K. Wolinski, J. Anchell,
D. Bernholdt, P. Borowski, T. Clark, D. Clerc, H. Dachsel, M. Deegan,
K. Dyall, D. Elwood, E. Glendening, M. Gutowski, A. Hess, J. Jaffe,
B. Johnson, J. Ju, R. Kobayashi, R. Kutteh, Z. Lin, R. Littlefield,
X. Long, B. Meng, T. Nakajima, S. Niu, L. Pollack, M. Rosing, G. Sandrone,
M. Stave, H. Taylor, G. Thomas, J. H. van Lenthe, A. Wong, Z. Zhang.
Total times cpu: 1.9s wall: 2.9s