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S-Wave Gaussian Expansion library (GEEP). More regtests. clean and reorganized the directory
of QMMM regtests in order to avoid multiple copies of same files. svn-origin-rev: 5805
This commit is contained in:
parent
264932f61b
commit
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165 changed files with 3484 additions and 35621 deletions
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@ -307,6 +307,7 @@ MODULE input_constants
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INTEGER, PARAMETER, PUBLIC :: do_qmmm_none=0,&
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do_qmmm_grid=1,&
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do_qmmm_gauss=2,&
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do_qmmm_swave=3,&
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do_qmmm_link_imomm=1,&
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do_qmmm_link_gho=2,&
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do_qmmm_link_pseudo=3,&
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@ -137,7 +137,8 @@ CONTAINS
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CALL keyword_create(keyword, name="nocompatibility",&
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description="This keyword disables the compatibility of QM/MM "//&
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"potential between CPMD and CP2K implementations. The compatibility"//&
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" is achieved using an MM potential of the form: Erf[x/rc]/x + (1/rc -2/(pi^1/2*rc))*Exp[-(x/rc)^2] .",&
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" is achieved using an MM potential of the form: Erf[x/rc]/x + (1/rc -2/(pi^1/2*rc))*Exp[-(x/rc)^2] ."//&
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"This keyword has effect only selecting GAUSS or GRID QMMM type.",&
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usage="nocompatibility LOGICAL",&
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default_l_val=.FALSE., lone_keyword_l_val=.TRUE., error=error)
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CALL section_add_keyword(section,keyword,error=error)
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@ -179,11 +180,12 @@ CONTAINS
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variants=s2a("QMMM_COUPLING","ECOUPL"),&
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description="Specifies the type of the QM - MM electrostatic coupling.",&
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usage="E_COUPL GAUSS",&
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enum_c_vals=s2a( "NONE","GRID","GAUSS"),&
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enum_i_vals=(/ do_qmmm_none, do_qmmm_grid, do_qmmm_gauss/),&
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enum_c_vals=s2a( "NONE","GRID","GAUSS","S-WAVE"),&
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enum_i_vals=(/ do_qmmm_none, do_qmmm_grid, do_qmmm_gauss, do_qmmm_swave/),&
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enum_desc=s2a("Mechanical coupling (i.e. classical point charge based)", &
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"Using analytical collocation on the grids (for debugging/reference only)",&
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"Using fast gaussian expansion of he electrostatic potential (recommended)"),&
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"Using fast gaussian expansion of the electrostatic potential (Erf(r/rc)/r)",&
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"Using fast gaussian expansion of the s-wave electrostatic potential"),&
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default_i_val=do_qmmm_none, error=error)
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CALL section_add_keyword(section,keyword,error=error)
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CALL keyword_release(keyword,error=error)
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@ -238,7 +240,8 @@ CONTAINS
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CALL keyword_release(keyword,error=error)
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CALL keyword_create(keyword, name="CORR_RADIUS",&
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description="Specifies the correction radius of the atomic kinds [angstrom]",&
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description="Specifies the correction radius of the atomic kinds [angstrom]."//&
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" The correction radius is connected to the use of the compatibility keyword.",&
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usage="RADIUS real",n_var=1,type_of_var=real_t,error=error)
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CALL section_add_keyword(subsection,keyword,error=error)
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CALL keyword_release(keyword,error=error)
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@ -37,6 +37,7 @@ MODULE qmmm_electrostatic_methods
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do_qmmm_gauss,&
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do_qmmm_grid,&
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do_qmmm_none,&
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do_qmmm_swave,&
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linear_interp,&
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spline3_nopbc_interp,&
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spline3_pbc_interp
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@ -157,7 +158,7 @@ CONTAINS
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IF (qs_env%dft_control%qs_control%semi_empirical) THEN
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! SEMIEMPIRICAL
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SELECT CASE(qmmm_env%qmmm_coupl_type)
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CASE(do_qmmm_grid,do_qmmm_gauss)
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CASE(do_qmmm_grid,do_qmmm_gauss,do_qmmm_swave)
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CALL cp_unimplemented_error(fromWhere=routineP, &
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message="QM/MM electrostatic coupling not yet implemented for semiempirical.", &
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error=error, error_level=cp_failure_level)
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@ -180,7 +181,7 @@ CONTAINS
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mm_particles=mm_particles,&
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mm_cell=mm_cell,&
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error=error)
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CASE(do_qmmm_gauss)
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CASE(do_qmmm_gauss,do_qmmm_swave)
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IF (iw>0) &
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WRITE(iw,'(T2,"QMMM|",1X,A)')&
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"QM/MM Coupling computed collocating the Gaussian Potential Functions."
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@ -30,7 +30,8 @@ MODULE qmmm_elpot
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USE cp_para_types, ONLY: cp_para_env_type
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USE erf_fn, ONLY: erf
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USE input_constants, ONLY: do_qmmm_gauss,&
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do_qmmm_grid
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do_qmmm_grid,&
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do_qmmm_swave
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USE input_section_types, ONLY: section_vals_get_subs_vals,&
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section_vals_type,&
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section_vals_val_get
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@ -160,7 +161,7 @@ CONTAINS
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SELECT CASE(qmmm_coupl_type)
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CASE(do_qmmm_grid)
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ALLOCATE(pot0_2(3,np), stat=stat)
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CASE(do_qmmm_gauss)
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CASE(do_qmmm_gauss,do_qmmm_swave)
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ALLOCATE(pot0_2(2,np), stat=stat)
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END SELECT
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CPPostcondition(stat==0,cp_failure_level,routineP,error,failure)
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@ -214,21 +215,34 @@ CONTAINS
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CLOSE(21)
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END IF
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END IF
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CASE(do_qmmm_gauss)
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pot0_2(1,1)= 2.0_dp/(rootpi*rc)
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pot0_2(2,1)= 0.0_dp
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x=0.0_dp
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DO i=2,np
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x=x+dx
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pot0_2(1,i)=erf(x/rc)/x
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t=2._dp/(rootpi*x*rc)*EXP(-(x/rc)**2)
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pot0_2(2,i)=(t-pot0_2(1,i)/x)*dx
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END DO
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CASE(do_qmmm_gauss,do_qmmm_swave)
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IF (qmmm_coupl_type==do_qmmm_gauss) THEN
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! Smooth Coulomb Potential :: Erf(x/rc)/x
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pot0_2(1,1)= 2.0_dp/(rootpi*rc)
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pot0_2(2,1)= 0.0_dp
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x=0.0_dp
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DO i=2,np
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x=x+dx
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pot0_2(1,i)=erf(x/rc)/x
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t=2._dp/(rootpi*x*rc)*EXP(-(x/rc)**2)
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pot0_2(2,i)=(t-pot0_2(1,i)/x)*dx
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END DO
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ELSEIF (qmmm_coupl_type==do_qmmm_swave) THEN
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! S-wave expansion :: 1/x - exp(-2*x/rc) * ( 1/x - 1/rc )
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pot0_2(1,1)= 1.0_dp/rc
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pot0_2(2,1)= 0.0_dp
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x=0.0_dp
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DO i=2,np
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x=x+dx
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t=EXP(-2.0_dp*x/rc)/rc
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pot0_2(1,i)=(1.0_dp-t*(rc+x))/x
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pot0_2(2,i)=((t*(rc**2+2.0_dp*rc*x+2.0_dp*x**2)/rc-1.0_dp)/x**2)*dx
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END DO
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END IF
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pgf => pgfs(K)%pgf
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CPPostcondition(pgf%Elp_Radius==rc,cp_failure_level,routineP,error,failure)
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ig_start = 1
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IF (compatibility) ig_start = 2
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IF (compatibility.AND.(qmmm_coupl_type==do_qmmm_gauss)) ig_start = 2
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DO Ig = ig_start, pgf%number_of_gaussians
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A = pgf%Ak(Ig)
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G = pgf%Gk(Ig)
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@ -253,14 +267,15 @@ CONTAINS
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IF (para_env%ionode) THEN
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OPEN(UNIT=21,FILE=FileName)
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WRITE(21,'(A)')"# MM ELECTROSTATIC POTENTIAL - UNIDIMENSIONAL - ATOMIC UNITS"
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WRITE(21,'(A,T10,A,T30,A,T211,A)')"#","Xval","Gaussians","LongRange"
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WRITE(21,'(A,I5)')"# MM ELECTROSTATIC POTENTIAL - Nr. of Gaussians:",pgf%number_of_gaussians
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WRITE(21,'(A,T10,A,T30,A,T300,A)')"#","Xval","Gaussians","LongRange"
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myFormat = "T10,F15.9,T30,"
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DO Ig=1,pgf%number_of_gaussians
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myind = INDEX(myFormat," ")
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WRITE(myFormat(myind:),'(A6)')"F12.9,"
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END DO
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myind = INDEX(myFormat," ")-1
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myFormat = myFormat(1:myind)//"T211,F15.9"
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myFormat = myFormat(1:myind)//"T300,F15.9"
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myind = INDEX(myFormat," ")-1
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x=0.0_dp
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DO i=1,np
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@ -271,7 +286,6 @@ CONTAINS
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CLOSE(21)
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END IF
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END IF
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CASE DEFAULT
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DEALLOCATE(potentials(K)%Pot)
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CPPostcondition(stat==0,cp_fatal_level,routineP,error,failure)
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@ -237,6 +237,212 @@ MODULE qmmm_gaussian_data
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REAL(KIND=dp), PARAMETER, PUBLIC :: g18_a16 = 0.5721690_dp, g18_b16 = 0.525730_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: g18_a17 = 0.0309731_dp, g18_b17 = 3.918400_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: g18_a18 = 0.0429091_dp, g18_b18 = 4.928750_dp
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!
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! S-WAVE expansion
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! S2
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REAL(KIND=dp), PARAMETER, PUBLIC :: s2_rc = 1.2_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s2_a1 = 0.1167720_dp, s2_b1 = 3.15760_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s2_a2 = 0.0537459_dp, s2_b2 = 1.66713_dp
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! S3
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REAL(KIND=dp), PARAMETER, PUBLIC :: s3_rc = 1.05_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s3_a1 = 0.1258370_dp, s3_b1 = 3.54518_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s3_a2 = 0.0920562_dp, s3_b2 = 2.17201_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s3_a3 = 0.0354098_dp, s3_b3 = 1.16797_dp
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! S4
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REAL(KIND=dp), PARAMETER, PUBLIC :: s4_rc = 0.90_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s4_a1 = 0.1237040_dp, s4_b1 = 3.82356_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s4_a2 = 0.0263957_dp, s4_b2 = 0.84445_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s4_a3 = 0.0773548_dp, s4_b3 = 1.56300_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s4_a4 = 0.1243300_dp, s4_b4 = 2.49568_dp
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! S5
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REAL(KIND=dp), PARAMETER, PUBLIC :: s5_rc = 0.80_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s5_a1 = 0.0601509_dp, s5_b1 = 1.169940_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s5_a2 = 0.1133640_dp, s5_b2 = 1.853660_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s5_a3 = 0.1120710_dp, s5_b3 = 4.084220_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s5_a4 = 0.1334100_dp, s5_b4 = 2.762410_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s5_a5 = 0.0186655_dp, s5_b5 = 0.633305_dp
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! S6
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REAL(KIND=dp), PARAMETER, PUBLIC :: s6_rc = 0.70_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s6_a1 = 0.0494163_dp, s6_b1 = 0.889897_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s6_a2 = 0.1415590_dp, s6_b2 = 2.073620_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s6_a3 = 0.1311110_dp, s6_b3 = 2.977960_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s6_a4 = 0.1012530_dp, s6_b4 = 4.306440_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s6_a5 = 0.1037040_dp, s6_b5 = 1.405500_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s6_a6 = 0.0144409_dp, s6_b6 = 0.482098_dp
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! S7
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REAL(KIND=dp), PARAMETER, PUBLIC :: s7_rc = 0.65_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s7_a1 = 0.08156290_dp, s7_b1 = 1.104000_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s7_a2 = 0.00971659_dp, s7_b2 = 0.379602_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s7_a3 = 0.09067690_dp, s7_b3 = 4.537130_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s7_a4 = 0.14334400_dp, s7_b4 = 2.290480_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s7_a5 = 0.13012600_dp, s7_b5 = 1.619190_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s7_a6 = 0.11794100_dp, s7_b6 = 3.205850_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s7_a7 = 0.03510960_dp, s7_b7 = 0.700361_dp
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! S8
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REAL(KIND=dp), PARAMETER, PUBLIC :: s8_rc = 0.60_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s8_a1 = 0.14676300_dp, s8_b1 = 1.802170_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s8_a2 = 0.00686211_dp, s8_b2 = 0.302201_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s8_a3 = 0.08248590_dp, s8_b3 = 4.741690_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s8_a4 = 0.10588700_dp, s8_b4 = 3.410740_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s8_a5 = 0.06409090_dp, s8_b5 = 0.877859_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s8_a6 = 0.11461200_dp, s8_b6 = 1.283730_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s8_a7 = 0.13708200_dp, s8_b7 = 2.482170_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s8_a8 = 0.02571900_dp, s8_b8 = 0.557431_dp
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! S9
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REAL(KIND=dp), PARAMETER, PUBLIC :: s9_rc = 0.55_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s9_a1 = 0.0760147_dp, s9_b1 = 4.924130_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s9_a2 = 0.0050867_dp, s9_b2 = 0.242656_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s9_a3 = 0.1524530_dp, s9_b3 = 1.962780_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s9_a4 = 0.0993944_dp, s9_b4 = 1.028540_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s9_a5 = 0.1433380_dp, s9_b5 = 1.438020_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s9_a6 = 0.1267950_dp, s9_b6 = 2.655630_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s9_a7 = 0.0958376_dp, s9_b7 = 3.595590_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s9_a8 = 0.0511698_dp, s9_b8 = 0.704455_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s9_a9 = 0.0195500_dp, s9_b9 = 0.447544_dp
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! S10
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_rc = 0.5_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_a1 = 0.11585200_dp, s10_b1 = 2.814420_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_a2 = 0.01551000_dp, s10_b2 = 0.361841_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_a3 = 0.08772520_dp, s10_b3 = 3.762340_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_a4 = 0.16279600_dp, s10_b4 = 1.572690_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_a5 = 0.08664120_dp, s10_b5 = 0.830482_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_a6 = 0.13675500_dp, s10_b6 = 1.158370_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_a7 = 0.04201910_dp, s10_b7 = 0.569340_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_a8 = 0.14880800_dp, s10_b8 = 2.107180_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_a9 = 0.07080240_dp, s10_b9 = 5.087590_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s10_a10 = 0.00396733_dp, s10_b10 = 0.196230_dp
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! S11
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_rc = 0.45_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a1 = 0.16967500_dp, s11_b1 = 1.274890_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a2 = 0.01316070_dp, s11_b2 = 0.296680_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a3 = 0.06640200_dp, s11_b3 = 5.239300_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a4 = 0.10578100_dp, s11_b4 = 2.964600_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a5 = 0.07769660_dp, s11_b5 = 0.677602_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a6 = 0.08097080_dp, s11_b6 = 3.917730_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a7 = 0.16973700_dp, s11_b7 = 1.696540_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a8 = 0.13064000_dp, s11_b8 = 0.942777_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a9 = 0.03627480_dp, s11_b9 = 0.465541_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a10 = 0.13917200_dp, s11_b10 = 2.244230_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s11_a11 = 0.00336822_dp, s11_b11 = 0.161548_dp
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! S12
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REAL(KIND=dp), PARAMETER, PUBLIC :: s12_rc = 0.40_dp
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REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a1 = 0.09642700_dp, s12_b1 = 3.118890_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a2 = 0.17691800_dp, s12_b2 = 1.052170_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a3 = 0.06232170_dp, s12_b3 = 5.393160_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a4 = 0.01269890_dp, s12_b4 = 0.252183_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a5 = 0.07481830_dp, s12_b5 = 4.075740_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a6 = 0.12917000_dp, s12_b6 = 0.782380_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a7 = 0.03450160_dp, s12_b7 = 0.391473_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a8 = 0.12664700_dp, s12_b8 = 2.387640_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a9 = 0.07450870_dp, s12_b9 = 0.565577_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a10 = 0.18916800_dp, s12_b10 = 1.390920_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a11 = 0.16350600_dp, s12_b11 = 1.824470_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s12_a12 = 0.00339586_dp, s12_b12 = 0.139492_dp
|
||||
! S13
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_rc = 0.35_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a1 = 0.0827110_dp, s13_b1 = 3.406540_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a2 = 0.1088730_dp, s13_b2 = 2.646630_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a3 = 0.0548105_dp, s13_b3 = 5.651890_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a4 = 0.1851320_dp, s13_b4 = 1.572120_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a5 = 0.0153281_dp, s13_b5 = 0.227432_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a6 = 0.1447980_dp, s13_b6 = 0.684903_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a7 = 0.0400841_dp, s13_b7 = 0.348420_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a8 = 0.1976780_dp, s13_b8 = 0.915974_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a9 = 0.0845825_dp, s13_b9 = 0.498603_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a10 = 0.2124150_dp, s13_b10 = 1.204860_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a11 = 0.0643854_dp, s13_b11 = 4.368000_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a12 = 0.1438660_dp, s13_b12 = 2.044290_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s13_a13 = 0.0043540_dp, s13_b13 = 0.127923_dp
|
||||
! S14
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_rc = 0.3_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a1 = 0.1185130_dp, s14_b1 = 2.483340_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a2 = 0.2451880_dp, s14_b2 = 1.119610_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a3 = 0.0585112_dp, s14_b3 = 0.327881_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a4 = 0.2441530_dp, s14_b4 = 0.851146_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a5 = 0.1561530_dp, s14_b5 = 1.909900_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a6 = 0.1178640_dp, s14_b6 = 0.466300_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a7 = 0.0710939_dp, s14_b7 = 4.176560_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a8 = 0.0907698_dp, s14_b8 = 3.219580_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a9 = 0.0298147_dp, s14_b9 = 5.495980_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a10 = 0.0233818_dp, s14_b10 = 0.215814_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a11 = 0.2037940_dp, s14_b11 = 1.464080_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a12 = 0.1909540_dp, s14_b12 = 0.637845_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a13 = 0.0300539_dp, s14_b13 = 5.481830_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s14_a14 = 0.0069580_dp, s14_b14 = 0.122528_dp
|
||||
! S15
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_rc = 0.25_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a1 = 0.0945048_dp, s15_b1 = 2.945510_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a2 = 0.2601310_dp, s15_b2 = 0.589258_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a3 = 0.1267470_dp, s15_b3 = 2.288550_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a4 = 0.0389633_dp, s15_b4 = 0.203996_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a5 = 0.1688290_dp, s15_b5 = 1.763470_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a6 = 0.2822050_dp, s15_b6 = 1.031520_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a7 = 0.3048940_dp, s15_b7 = 0.784165_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a8 = 0.0262863_dp, s15_b8 = 5.598990_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a9 = 0.0231427_dp, s15_b9 = 5.844390_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a10 = 0.0484052_dp, s15_b10 = 4.606440_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a11 = 0.0680845_dp, s15_b11 = 3.734880_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a12 = 0.0918188_dp, s15_b12 = 0.306903_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a13 = 0.2236530_dp, s15_b13 = 1.351070_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a14 = 0.1732960_dp, s15_b14 = 0.433086_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s15_a15 = 0.0122787_dp, s15_b15 = 0.116976_dp
|
||||
! S16
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_rc = 0.20_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a1 = 0.0355363_dp, s16_b1 = 5.119830_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a2 = 0.0250461_dp, s16_b2 = 0.111228_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a3 = 0.0555360_dp, s16_b3 = 4.232680_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a4 = 0.0747956_dp, s16_b4 = 3.406690_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a5 = 0.0739676_dp, s16_b5 = 0.192075_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a6 = 0.1016150_dp, s16_b6 = 2.694530_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a7 = 0.1600940_dp, s16_b7 = 0.285880_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a8 = 0.3823200_dp, s16_b8 = 0.717807_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a9 = 0.0174934_dp, s16_b9 = 5.965260_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a10 = 0.1369610_dp, s16_b10 = 2.100230_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a11 = 0.1835200_dp, s16_b11 = 1.620280_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a12 = 0.2453470_dp, s16_b12 = 1.240770_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a13 = 0.3219940_dp, s16_b13 = 0.945350_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a14 = 0.0174978_dp, s16_b14 = 5.965260_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a15 = 0.3677700_dp, s16_b15 = 0.540682_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s16_a16 = 0.2742210_dp, s16_b16 = 0.399796_dp
|
||||
! S17
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_rc = 0.15_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a1 = 0.0844127_dp, s17_b1 = 3.242020_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a2 = 0.5321910_dp, s17_b2 = 0.495959_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a3 = 0.4682070_dp, s17_b3 = 0.659162_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a4 = 0.0316333_dp, s17_b4 = 4.520730_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a5 = 0.1497940_dp, s17_b5 = 1.957400_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a6 = 0.0181484_dp, s17_b6 = 5.592050_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a7 = 0.0181805_dp, s17_b7 = 5.592050_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a8 = 0.4758870_dp, s17_b8 = 0.368353_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a9 = 0.0474720_dp, s17_b9 = 4.043220_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a10 = 0.2678960_dp, s17_b10 = 1.148850_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a11 = 0.1998770_dp, s17_b11 = 1.504430_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a12 = 0.0181970_dp, s17_b12 = 5.592050_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a13 = 0.3261780_dp, s17_b13 = 0.265656_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a14 = 0.1720050_dp, s17_b14 = 0.180302_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a15 = 0.1127310_dp, s17_b15 = 2.529320_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a16 = 0.3595840_dp, s17_b16 = 0.872121_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s17_a17 = 0.0642967_dp, s17_b17 = 0.105311_dp
|
||||
! S18
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_rc = 0.05_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a1 = 0.1013430_dp, s18_b1 = 0.0270641_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a2 = 0.0583885_dp, s18_b2 = 4.2001100_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a3 = 1.1587600_dp, s18_b3 = 0.3072560_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a4 = 0.1255030_dp, s18_b4 = 2.3069300_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a5 = 0.0469195_dp, s18_b5 = 3.5331200_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a6 = 0.3728020_dp, s18_b6 = 0.0498868_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a7 = 0.8990960_dp, s18_b7 = 0.0785500_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a8 = 0.3146440_dp, s18_b8 = 1.0197600_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a9 = 1.5250400_dp, s18_b9 = 0.1149420_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a10 = 0.4308660_dp, s18_b10 = 0.7644820_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a11 = 0.8278010_dp, s18_b11 = 0.4197150_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a12 = 0.5947340_dp, s18_b12 = 0.5687230_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a13 = 1.5771300_dp, s18_b13 = 0.2235160_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a14 = 0.1707930_dp, s18_b14 = 1.7733300_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a15 = 1.8160800_dp, s18_b15 = 0.1616990_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a16 = 0.0857559_dp, s18_b16 = 2.9441700_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a17 = 0.2313250_dp, s18_b17 = 1.3500600_dp
|
||||
REAL(KIND=dp), PARAMETER, PUBLIC :: s18_a18 = 0.0593302_dp, s18_b18 = 5.4023800_dp
|
||||
|
||||
END MODULE qmmm_gaussian_data
|
||||
|
||||
|
|
|
|||
|
|
@ -31,7 +31,8 @@ MODULE qmmm_gaussian_init
|
|||
USE cp_para_types, ONLY: cp_para_env_type
|
||||
USE gaussian_gridlevels, ONLY: gaussian_gridlevel,&
|
||||
gridlevel_info_type
|
||||
USE input_constants, ONLY: do_qmmm_gauss
|
||||
USE input_constants, ONLY: do_qmmm_gauss,&
|
||||
do_qmmm_swave
|
||||
USE input_section_types, ONLY: section_vals_get_subs_vals,&
|
||||
section_vals_type,&
|
||||
section_vals_val_get
|
||||
|
|
@ -43,7 +44,8 @@ MODULE qmmm_gaussian_init
|
|||
USE qmmm_gaussian_data, ONLY: max_geep_lib_gauss,&
|
||||
min_geep_lib_gauss
|
||||
USE qmmm_gaussian_input, ONLY: read_mm_potential,&
|
||||
set_mm_potential
|
||||
set_mm_potential_erf,&
|
||||
set_mm_potential_swave
|
||||
USE qmmm_gaussian_types, ONLY: qmmm_gaussian_p_type,&
|
||||
qmmm_gaussian_type
|
||||
USE qs_util, ONLY: exp_radius
|
||||
|
|
@ -130,7 +132,7 @@ CONTAINS
|
|||
CPPostcondition(num_geep_gauss<=max_geep_lib_gauss,cp_failure_level,routineP,error,failure)
|
||||
END IF
|
||||
SELECT CASE(qmmm_coupl_type)
|
||||
CASE(do_qmmm_gauss)
|
||||
CASE(do_qmmm_gauss,do_qmmm_swave)
|
||||
!
|
||||
! Preprocessing...
|
||||
!
|
||||
|
|
@ -194,11 +196,16 @@ CONTAINS
|
|||
END IF
|
||||
!
|
||||
IF (use_geep_lib) THEN
|
||||
CALL set_mm_potential(qmmm_gaussian_fns, qm_cell_small,&
|
||||
compatibility, num_geep_gauss, error)
|
||||
IF (qmmm_coupl_type==do_qmmm_gauss) THEN
|
||||
CALL set_mm_potential_erf(qmmm_gaussian_fns, qm_cell_small,&
|
||||
compatibility, num_geep_gauss, error)
|
||||
ELSEIF (qmmm_coupl_type==do_qmmm_swave) THEN
|
||||
CALL set_mm_potential_swave(qmmm_gaussian_fns, qm_cell_small,&
|
||||
num_geep_gauss, error)
|
||||
END IF
|
||||
ELSE
|
||||
CALL read_mm_potential(para_env, qmmm_gaussian_fns, qm_cell_small,&
|
||||
compatibility, qmmm_section, error)
|
||||
(compatibility.AND.(qmmm_coupl_type==do_qmmm_gauss)), qmmm_section, error)
|
||||
END IF
|
||||
!
|
||||
CALL pw_env_get(pw_env,pw_pools=pools, gridlevel_info=gridlevel_info,&
|
||||
|
|
@ -234,5 +241,4 @@ CONTAINS
|
|||
END IF
|
||||
END SUBROUTINE qmmm_gaussian_initialize
|
||||
|
||||
|
||||
END MODULE qmmm_gaussian_init
|
||||
|
|
|
|||
|
|
@ -49,7 +49,9 @@ MODULE qmmm_gaussian_input
|
|||
LOGICAL, PRIVATE, PARAMETER :: debug_this_module=.TRUE.
|
||||
CHARACTER(len=*), PARAMETER, PRIVATE :: moduleN = 'qmmm_gaussian_input'
|
||||
|
||||
PUBLIC :: read_mm_potential, set_mm_potential
|
||||
PUBLIC :: read_mm_potential,&
|
||||
set_mm_potential_swave,&
|
||||
set_mm_potential_erf
|
||||
!***
|
||||
!****************************************************************************
|
||||
CONTAINS
|
||||
|
|
@ -186,13 +188,13 @@ CONTAINS
|
|||
|
||||
END SUBROUTINE read_mm_potential
|
||||
|
||||
!!****f* qmmm_gaussian_input/set_mm_potential [1.0] *
|
||||
!!****f* qmmm_gaussian_input/set_mm_potential_erf [1.0] *
|
||||
!!
|
||||
!! NAME
|
||||
!! set_mm_potential
|
||||
!! set_mm_potential_erf
|
||||
!!
|
||||
!! FUNCTION
|
||||
!! read MM_POTENTIAL file
|
||||
!! set the GEEP information for Erf(r/rc)/r
|
||||
!!
|
||||
!! NOTES
|
||||
!! -
|
||||
|
|
@ -208,7 +210,7 @@ CONTAINS
|
|||
!! 07.2005 created [tlaino]
|
||||
!!
|
||||
!!*************************************************************************
|
||||
SUBROUTINE set_mm_potential(qmmm_gaussian_fns, qm_cell_small,&
|
||||
SUBROUTINE set_mm_potential_erf(qmmm_gaussian_fns, qm_cell_small,&
|
||||
compatibility, num_geep_gauss, error)
|
||||
TYPE(qmmm_gaussian_p_type), &
|
||||
DIMENSION(:), POINTER :: qmmm_gaussian_fns
|
||||
|
|
@ -217,7 +219,7 @@ CONTAINS
|
|||
INTEGER, INTENT(IN) :: num_geep_gauss
|
||||
TYPE(cp_error_type), INTENT(inout) :: error
|
||||
|
||||
CHARACTER(len=*), PARAMETER :: routineN = 'set_mm_potential', &
|
||||
CHARACTER(len=*), PARAMETER :: routineN = 'set_mm_potential_erf', &
|
||||
routineP = moduleN//':'//routineN
|
||||
|
||||
INTEGER :: IRad, istart, Nog, Nval, stat
|
||||
|
|
@ -643,8 +645,456 @@ CONTAINS
|
|||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1:) = qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1:) / rc
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1:) = qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1:) * rc
|
||||
END DO
|
||||
END SUBROUTINE set_mm_potential
|
||||
END SUBROUTINE set_mm_potential_erf
|
||||
|
||||
!!****f* qmmm_gaussian_input/set_mm_potential_swave [1.0] *
|
||||
!!
|
||||
!! NAME
|
||||
!! set_mm_potential_swave
|
||||
!!
|
||||
!! FUNCTION
|
||||
!! set the GEEP information for the S-WAVE expansion
|
||||
!!
|
||||
!! NOTES
|
||||
!! -
|
||||
!!
|
||||
!! INPUTS
|
||||
!! - error: variable to control error logging, stopping,...
|
||||
!! see module cp_error_handling
|
||||
!!
|
||||
!! AUTHOR
|
||||
!! Teodoro Laino
|
||||
!!
|
||||
!! MODIFICATION HISTORY
|
||||
!! 02.2007 created [tlaino]
|
||||
!!
|
||||
!!*************************************************************************
|
||||
SUBROUTINE set_mm_potential_swave(qmmm_gaussian_fns, qm_cell_small,&
|
||||
num_geep_gauss, error)
|
||||
TYPE(qmmm_gaussian_p_type), &
|
||||
DIMENSION(:), POINTER :: qmmm_gaussian_fns
|
||||
TYPE(cell_type), POINTER :: qm_cell_small
|
||||
INTEGER, INTENT(IN) :: num_geep_gauss
|
||||
TYPE(cp_error_type), INTENT(inout) :: error
|
||||
|
||||
CHARACTER(len=*), PARAMETER :: routineN = 'set_mm_potential_swave', &
|
||||
routineP = moduleN//':'//routineN
|
||||
|
||||
INTEGER :: IRad, istart, Nog, Nval, stat
|
||||
LOGICAL :: failure
|
||||
REAL(KIND=dp) :: radius, rc
|
||||
|
||||
failure = .FALSE.
|
||||
Nval = SIZE(qmmm_gaussian_fns)
|
||||
DO IRad = 1, Nval
|
||||
qmmm_gaussian_fns(IRad)%pgf%Number_of_Gaussians = num_geep_gauss
|
||||
radius = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius
|
||||
istart = 0
|
||||
! Allocate Vectors
|
||||
SELECT CASE(num_geep_gauss)
|
||||
CASE(2)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s2_rc*bohr)
|
||||
CASE(3)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s3_rc*bohr)
|
||||
CASE(4)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s4_rc*bohr)
|
||||
CASE(5)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s5_rc*bohr)
|
||||
CASE(6)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s6_rc*bohr)
|
||||
CASE(7)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s7_rc*bohr)
|
||||
CASE(8)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s8_rc*bohr)
|
||||
CASE(9)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s9_rc*bohr)
|
||||
CASE(10)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s10_rc*bohr)
|
||||
CASE(11)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s11_rc*bohr)
|
||||
CASE(12)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s12_rc*bohr)
|
||||
CASE(13)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s13_rc*bohr)
|
||||
CASE(14)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s14_rc*bohr)
|
||||
CASE(15)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s15_rc*bohr)
|
||||
CASE(16)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s16_rc*bohr)
|
||||
CASE(17)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s17_rc*bohr)
|
||||
CASE(18)
|
||||
rc = qmmm_gaussian_fns(Irad)%pgf%Elp_Radius / (s18_rc*bohr)
|
||||
END SELECT
|
||||
NOG = qmmm_gaussian_fns(IRad)%pgf%Number_of_Gaussians
|
||||
ALLOCATE(qmmm_gaussian_fns(IRad)%pgf%Ak(NOG),stat=stat)
|
||||
CPPostcondition(stat==0,cp_failure_level,routineP,error,Failure)
|
||||
ALLOCATE(qmmm_gaussian_fns(IRad)%pgf%Gk(NOG),stat=stat)
|
||||
CPPostcondition(stat==0,cp_failure_level,routineP,error,Failure)
|
||||
SELECT CASE(num_geep_gauss)
|
||||
CASE(2)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s2_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s2_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s2_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s2_b2
|
||||
CASE(3)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s3_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s3_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s3_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s3_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s3_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s3_b3
|
||||
CASE(4)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s4_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s4_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s4_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s4_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s4_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s4_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s4_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s4_b4
|
||||
CASE(5)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s5_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s5_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s5_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s5_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s5_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s5_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s5_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s5_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s5_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s5_b5
|
||||
CASE(6)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s6_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s6_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s6_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s6_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s6_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s6_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s6_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s6_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s6_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s6_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s6_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s6_b6
|
||||
CASE(7)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s7_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s7_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s7_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s7_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s7_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s7_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s7_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s7_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s7_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s7_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s7_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s7_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s7_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s7_b7
|
||||
CASE(8)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s8_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s8_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s8_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s8_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s8_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s8_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s8_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s8_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s8_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s8_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s8_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s8_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s8_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s8_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s8_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s8_b8
|
||||
CASE(9)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s9_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s9_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s9_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s9_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s9_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s9_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s9_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s9_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s9_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s9_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s9_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s9_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s9_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s9_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s9_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s9_b8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+9) = s9_a9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+9) = s9_b9
|
||||
CASE(10)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s10_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s10_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s10_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s10_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s10_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s10_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s10_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s10_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s10_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s10_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s10_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s10_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s10_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s10_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s10_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s10_b8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+9) = s10_a9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+9) = s10_b9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+10)= s10_a10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+10)= s10_b10
|
||||
CASE(11)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s11_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s11_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s11_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s11_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s11_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s11_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s11_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s11_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s11_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s11_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s11_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s11_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s11_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s11_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s11_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s11_b8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+9) = s11_a9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+9) = s11_b9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+10)= s11_a10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+10)= s11_b10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+11)= s11_a11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+11)= s11_b11
|
||||
CASE(12)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s12_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s12_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s12_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s12_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s12_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s12_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s12_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s12_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s12_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s12_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s12_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s12_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s12_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s12_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s12_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s12_b8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+9) = s12_a9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+9) = s12_b9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+10)= s12_a10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+10)= s12_b10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+11)= s12_a11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+11)= s12_b11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+12)= s12_a12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+12)= s12_b12
|
||||
CASE(13)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s13_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s13_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s13_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s13_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s13_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s13_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s13_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s13_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s13_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s13_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s13_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s13_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s13_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s13_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s13_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s13_b8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+9) = s13_a9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+9) = s13_b9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+10)= s13_a10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+10)= s13_b10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+11)= s13_a11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+11)= s13_b11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+12)= s13_a12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+12)= s13_b12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+13)= s13_a13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+13)= s13_b13
|
||||
CASE(14)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s14_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s14_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s14_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s14_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s14_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s14_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s14_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s14_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s14_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s14_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s14_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s14_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s14_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s14_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s14_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s14_b8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+9) = s14_a9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+9) = s14_b9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+10)= s14_a10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+10)= s14_b10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+11)= s14_a11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+11)= s14_b11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+12)= s14_a12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+12)= s14_b12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+13)= s14_a13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+13)= s14_b13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+14)= s14_a14
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+14)= s14_b14
|
||||
CASE(15)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s15_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s15_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s15_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s15_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s15_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s15_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s15_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s15_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s15_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s15_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s15_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s15_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s15_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s15_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s15_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s15_b8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+9) = s15_a9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+9) = s15_b9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+10)= s15_a10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+10)= s15_b10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+11)= s15_a11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+11)= s15_b11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+12)= s15_a12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+12)= s15_b12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+13)= s15_a13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+13)= s15_b13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+14)= s15_a14
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+14)= s15_b14
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+15)= s15_a15
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+15)= s15_b15
|
||||
CASE(16)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s16_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s16_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s16_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s16_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s16_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s16_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s16_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s16_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s16_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s16_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s16_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s16_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s16_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s16_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s16_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s16_b8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+9) = s16_a9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+9) = s16_b9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+10)= s16_a10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+10)= s16_b10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+11)= s16_a11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+11)= s16_b11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+12)= s16_a12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+12)= s16_b12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+13)= s16_a13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+13)= s16_b13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+14)= s16_a14
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+14)= s16_b14
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+15)= s16_a15
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+15)= s16_b15
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+16)= s16_a16
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+16)= s16_b16
|
||||
CASE(17)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s17_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s17_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s17_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s17_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s17_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s17_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s17_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s17_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s17_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s17_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s17_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s17_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s17_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s17_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s17_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s17_b8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+9) = s17_a9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+9) = s17_b9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+10)= s17_a10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+10)= s17_b10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+11)= s17_a11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+11)= s17_b11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+12)= s17_a12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+12)= s17_b12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+13)= s17_a13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+13)= s17_b13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+14)= s17_a14
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+14)= s17_b14
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+15)= s17_a15
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+15)= s17_b15
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+16)= s17_a16
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+16)= s17_b16
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+17)= s17_a17
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+17)= s17_b17
|
||||
CASE(18)
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1) = s18_a1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1) = s18_b1
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+2) = s18_a2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+2) = s18_b2
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+3) = s18_a3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+3) = s18_b3
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+4) = s18_a4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+4) = s18_b4
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+5) = s18_a5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+5) = s18_b5
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+6) = s18_a6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+6) = s18_b6
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+7) = s18_a7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+7) = s18_b7
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+8) = s18_a8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+8) = s18_b8
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+9) = s18_a9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+9) = s18_b9
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+10)= s18_a10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+10)= s18_b10
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+11)= s18_a11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+11)= s18_b11
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+12)= s18_a12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+12)= s18_b12
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+13)= s18_a13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+13)= s18_b13
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+14)= s18_a14
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+14)= s18_b14
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+15)= s18_a15
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+15)= s18_b15
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+16)= s18_a16
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+16)= s18_b16
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+17)= s18_a17
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+17)= s18_b17
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+18)= s18_a18
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+18)= s18_b18
|
||||
END SELECT
|
||||
qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1:) = qmmm_gaussian_fns(IRad)%pgf%Ak(istart+1:) / rc
|
||||
qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1:) = qmmm_gaussian_fns(IRad)%pgf%Gk(istart+1:) * rc
|
||||
END DO
|
||||
END SUBROUTINE set_mm_potential_swave
|
||||
|
||||
END MODULE qmmm_gaussian_input
|
||||
|
||||
|
|
|
|||
|
|
@ -61,7 +61,7 @@ MODULE qmmm_init
|
|||
USE input_constants, ONLY: &
|
||||
RADIUS_QMMM_DEFAULT, do_center_grid, do_center_none, do_fist, do_qmmm, &
|
||||
do_qmmm_gauss, do_qmmm_link_gho, do_qmmm_link_imomm, &
|
||||
do_qmmm_link_pseudo, do_qmmm_none, do_qs
|
||||
do_qmmm_link_pseudo, do_qmmm_none, do_qmmm_swave, do_qs
|
||||
USE input_section_types, ONLY: section_vals_get,&
|
||||
section_vals_get_subs_vals,&
|
||||
section_vals_type,&
|
||||
|
|
@ -732,7 +732,7 @@ CONTAINS
|
|||
qmmm_section=qmmm_section,&
|
||||
error=error)
|
||||
|
||||
IF (qmmm_env_qm%qmmm_coupl_type == do_qmmm_gauss) THEN
|
||||
IF ((qmmm_env_qm%qmmm_coupl_type == do_qmmm_gauss).OR.(qmmm_env_qm%qmmm_coupl_type == do_qmmm_swave)) THEN
|
||||
DO i = 1, SIZE(maxradius)
|
||||
maxradius(i) = MAX( maxradius(i), maxradius2(i))
|
||||
END DO
|
||||
|
|
|
|||
|
|
@ -39,6 +39,7 @@ MODULE qmmm_methods
|
|||
do_qmmm_gauss,&
|
||||
do_qmmm_grid,&
|
||||
do_qmmm_none,&
|
||||
do_qmmm_swave,&
|
||||
linear_interp,&
|
||||
spline3_nopbc_interp,&
|
||||
spline3_pbc_interp
|
||||
|
|
@ -187,7 +188,7 @@ CONTAINS
|
|||
IF (qs_env%dft_control%qs_control%semi_empirical) THEN
|
||||
! SEMIEMPIRICAL
|
||||
SELECT CASE(qmmm_env%qmmm_coupl_type)
|
||||
CASE(do_qmmm_grid,do_qmmm_gauss)
|
||||
CASE(do_qmmm_grid,do_qmmm_gauss,do_qmmm_swave)
|
||||
CALL cp_unimplemented_error(fromWhere=routineP, &
|
||||
message="QM/MM forces not yet implemented for semiempirical.", &
|
||||
error=error, error_level=cp_failure_level)
|
||||
|
|
@ -242,7 +243,7 @@ CONTAINS
|
|||
Forces_added_charges=Forces_added_charges,&
|
||||
mm_cell=mm_cell,&
|
||||
error=error)
|
||||
CASE(do_qmmm_gauss)
|
||||
CASE(do_qmmm_gauss,do_qmmm_swave)
|
||||
IF (iw>0) WRITE(iw,'(T2,"QMMM|",1X,A)')&
|
||||
"- QM/MM Coupling computed collocating the Gaussian Potential Functions."
|
||||
CALL qmmm_forces_with_gaussian(rho=rho_tot_r,&
|
||||
|
|
@ -1617,7 +1618,7 @@ CONTAINS
|
|||
mm_particles=mm_particles,&
|
||||
mm_cell=mm_cell,&
|
||||
error=error)
|
||||
CASE(do_qmmm_gauss)
|
||||
CASE(do_qmmm_gauss,do_qmmm_swave)
|
||||
CALL qmmm_elec_with_gaussian(qmmm_env=qmmm_env,&
|
||||
v_qmmm=v_qmmm_rspace,&
|
||||
mm_particles=mm_particles,&
|
||||
|
|
@ -1649,7 +1650,7 @@ CONTAINS
|
|||
END DO Atoms
|
||||
|
||||
SELECT CASE(qmmm_env%qmmm_coupl_type)
|
||||
CASE(do_qmmm_grid,do_qmmm_gauss)
|
||||
CASE(do_qmmm_grid,do_qmmm_gauss,do_qmmm_swave)
|
||||
IF (iw>0) WRITE(iw,'(/A/)')"CHECKING NUMERICAL Vs ANALYTICAL FORCES (Err%):"
|
||||
DO I = 1, num_mm_atoms
|
||||
IndMM = mm_atom_index(I)
|
||||
|
|
|
|||
|
|
@ -30,7 +30,8 @@ MODULE qmmm_per_elpot
|
|||
USE cp_para_types, ONLY: cp_para_env_type
|
||||
USE ewald_spline_util, ONLY: Setup_Ewald_Spline
|
||||
USE input_constants, ONLY: do_qmmm_gauss,&
|
||||
do_qmmm_grid
|
||||
do_qmmm_grid,&
|
||||
do_qmmm_swave
|
||||
USE input_section_types, ONLY: section_vals_get_subs_vals,&
|
||||
section_vals_type,&
|
||||
section_vals_val_get
|
||||
|
|
@ -102,11 +103,8 @@ CONTAINS
|
|||
n_rep_real(3), n_rep_real_val, ncoarsel, ncoarset, Ndim, stat
|
||||
INTEGER, DIMENSION(:), POINTER :: mm_atom_index
|
||||
LOGICAL :: failure
|
||||
REAL(KIND=dp) :: Ak, alpha, box(3), Fac(3), &
|
||||
fs, g, g2, Gk, Gmax, &
|
||||
mymaxradius, npl, npt, &
|
||||
Prefactor, rc, rc2, Rmax, &
|
||||
vec(3), vol
|
||||
REAL(KIND=dp) :: Ak, alpha, box(3), Fac(3), fs, g, g2, Gk, Gmax, &
|
||||
mymaxradius, npl, npt, Prefactor, rc, rc2, Rmax, tmp, vec(3), vol
|
||||
REAL(KIND=dp), DIMENSION(:), POINTER :: gx, gy, gz, Lg
|
||||
TYPE(cp_logger_type), POINTER :: logger
|
||||
TYPE(qmmm_gaussian_type), POINTER :: pgf
|
||||
|
|
@ -128,7 +126,7 @@ CONTAINS
|
|||
Ndim = (Kmax(1)+1)*(2*Kmax(2)+1)*(2*Kmax(3)+1)
|
||||
ig_start = 1
|
||||
n_rep_real = n_rep_real_val
|
||||
IF (compatibility) ig_start = 2
|
||||
IF (compatibility.AND.(qmmm_coupl_type==do_qmmm_gauss)) ig_start = 2
|
||||
|
||||
CPPrecondition(.NOT.ASSOCIATED(per_potentials),cp_failure_level,routineP,error,failure)
|
||||
ALLOCATE(per_potentials(SIZE(pgfs)),stat=stat)
|
||||
|
|
@ -143,7 +141,7 @@ CONTAINS
|
|||
CASE(do_qmmm_grid)
|
||||
! Not yet implemented for this case
|
||||
CPPostcondition(.FALSE.,cp_failure_level,routineP,error,failure)
|
||||
CASE(do_qmmm_gauss)
|
||||
CASE(do_qmmm_gauss,do_qmmm_swave)
|
||||
ALLOCATE(Lg(Ndim), stat=stat)
|
||||
CPPostcondition(stat==0,cp_failure_level,routineP,error,failure)
|
||||
ALLOCATE(gx(Ndim), stat=stat)
|
||||
|
|
@ -163,7 +161,7 @@ CONTAINS
|
|||
CASE(do_qmmm_grid)
|
||||
! Not yet implemented for this case
|
||||
CPPostcondition(.FALSE.,cp_failure_level,routineP,error,failure)
|
||||
CASE(do_qmmm_gauss)
|
||||
CASE(do_qmmm_gauss,do_qmmm_swave)
|
||||
|
||||
pgf => pgfs(K)%pgf
|
||||
idim = 0
|
||||
|
|
@ -183,7 +181,12 @@ CONTAINS
|
|||
g2 = DOT_PRODUCT(vec,vec)
|
||||
rc2 = rc*rc
|
||||
g = SQRT(g2)
|
||||
LG (idim) = 4.0_dp*Pi/g2 * EXP(-(g2*rc2)/4.0_dp)
|
||||
IF (qmmm_coupl_type==do_qmmm_gauss) THEN
|
||||
LG (idim) = 4.0_dp*Pi/g2 * EXP(-(g2*rc2)/4.0_dp)
|
||||
ELSEIF (qmmm_coupl_type==do_qmmm_swave) THEN
|
||||
tmp = 4.0_dp/rc2
|
||||
LG (idim) = 4.0_dp*Pi*tmp**2 / (g2*(g2+tmp)**2)
|
||||
END IF
|
||||
DO Ig = ig_start, pgf%number_of_gaussians
|
||||
Gk = pgf%Gk(Ig)
|
||||
Ak = pgf%Ak(Ig)*Pi**(3.0_dp/2.0_dp)*Gk**3.0_dp
|
||||
|
|
|
|||
|
|
@ -21,7 +21,8 @@ MODULE qmmm_pw_grid
|
|||
USE cell_types, ONLY: cell_type
|
||||
USE cp_para_types, ONLY: cp_para_env_type
|
||||
USE input_constants, ONLY: do_par_atom,&
|
||||
do_qmmm_gauss
|
||||
do_qmmm_gauss,&
|
||||
do_qmmm_swave
|
||||
USE kinds, ONLY: dp
|
||||
USE pw_env_types, ONLY: pw_env_get,&
|
||||
pw_env_type
|
||||
|
|
@ -94,7 +95,7 @@ CONTAINS
|
|||
failure = .FALSE.
|
||||
Maxdr = TINY(0.0_dp)
|
||||
Mindr = HUGE(0.0_dp)
|
||||
IF (qmmm_env%qmmm_coupl_type == do_qmmm_gauss) THEN
|
||||
IF ((qmmm_env%qmmm_coupl_type == do_qmmm_gauss).OR.(qmmm_env%qmmm_coupl_type == do_qmmm_swave)) THEN
|
||||
CALL pw_env_get(pw_env=pw_env,&
|
||||
pw_pools=pw_pools,&
|
||||
auxbas_grid=auxbas_grid,&
|
||||
|
|
|
|||
|
|
@ -23,7 +23,8 @@ MODULE qs_ks_qmmm_methods
|
|||
USE cp_control_types, ONLY: dft_control_type
|
||||
USE cube_utils, ONLY: cube_info_type,&
|
||||
init_cube_info
|
||||
USE input_constants, ONLY: do_qmmm_gauss
|
||||
USE input_constants, ONLY: do_qmmm_gauss,&
|
||||
do_qmmm_swave
|
||||
USE kinds, ONLY: dp
|
||||
USE pw_env_types, ONLY: pw_env_get,&
|
||||
pw_env_retain
|
||||
|
|
@ -164,7 +165,7 @@ CONTAINS
|
|||
CALL pw_pool_init_coeff(auxbas_pw_pool,ks_qmmm_env%v_qmmm_rspace,&
|
||||
use_data=REALDATA3D, in_space=REALSPACE,error=error)
|
||||
|
||||
IF (qmmm_env%qmmm_coupl_type.EQ.do_qmmm_gauss) THEN
|
||||
IF ((qmmm_env%qmmm_coupl_type==do_qmmm_gauss).OR.(qmmm_env%qmmm_coupl_type==do_qmmm_swave)) THEN
|
||||
CALL pw_env_get(ks_qmmm_env%pw_env,pw_pools=pools,error=error)
|
||||
ALLOCATE(cube_info(SIZE(pools)), stat=stat)
|
||||
CPPostcondition(stat==0,cp_failure_level,routineP,error,failure)
|
||||
|
|
|
|||
|
|
@ -1440,24 +1440,24 @@ Ar QZV3P-GTH
|
|||
1.8730000000 1.0000000000 0.0000000000 0.0000000000
|
||||
0.7630000000 0.0000000000 1.0000000000 0.0000000000
|
||||
0.3110000000 0.0000000000 0.0000000000 1.0000000000
|
||||
#
|
||||
Ru DZV-GTH
|
||||
4
|
||||
4 0 0 5 3
|
||||
3.49991750 0.53848369 -0.17399842 0.00000000
|
||||
1.34404981 -0.78427857 0.31491960 0.00000000
|
||||
0.58467458 -0.58658477 0.40648318 0.00000000
|
||||
0.12982809 -0.02434703 -0.55349152 0.00000000
|
||||
0.04943313 0.00584671 -0.65136258 1.00000000
|
||||
4 1 1 4 1
|
||||
3.96955639 0.11276136
|
||||
1.64584344 -0.47337112
|
||||
0.76429804 -0.52119152
|
||||
0.32628370 -0.15616782
|
||||
5 1 1 1 1
|
||||
0.05630080 1.00000000
|
||||
4 2 2 4 2
|
||||
1.58910397 -0.35207085 0.00000000
|
||||
0.65776363 -0.42298684 0.00000000
|
||||
0.25938261 -0.33138054 0.00000000
|
||||
0.09370823 -0.13967385 1.00000000
|
||||
|
||||
4
|
||||
4 0 0 5 3
|
||||
3.49991750 0.53848369 -0.17399842 0.00000000
|
||||
1.34404981 -0.78427857 0.31491960 0.00000000
|
||||
0.58467458 -0.58658477 0.40648318 0.00000000
|
||||
0.12982809 -0.02434703 -0.55349152 0.00000000
|
||||
0.04943313 0.00584671 -0.65136258 1.00000000
|
||||
4 1 1 4 1
|
||||
3.96955639 0.11276136
|
||||
1.64584344 -0.47337112
|
||||
0.76429804 -0.52119152
|
||||
0.32628370 -0.15616782
|
||||
5 1 1 1 1
|
||||
0.05630080 1.00000000
|
||||
4 2 2 4 2
|
||||
1.58910397 -0.35207085 0.00000000
|
||||
0.65776363 -0.42298684 0.00000000
|
||||
0.25938261 -0.33138054 0.00000000
|
||||
0.09370823 -0.13967385 1.00000000
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
CUTOFF 50
|
||||
&END MGRID
|
||||
|
|
@ -39,6 +39,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 8.0 8.0 8.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
File diff suppressed because it is too large
Load diff
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -69,6 +69,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 20
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME BASIS_SET
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../BASIS_SET
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -33,7 +33,7 @@
|
|||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
parmfile 2H2O.pot
|
||||
parmfile ../sample_pot/2H2O.pot
|
||||
parmtype CHM
|
||||
&spline
|
||||
rcut_nb 5.2917720830
|
||||
|
|
@ -49,12 +49,12 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL GAUSS
|
||||
MM_POTENTIAL_FILE_NAME MM_POTENTIAL
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-14
|
||||
EPS_X 1.0e-14
|
||||
|
|
@ -99,9 +99,9 @@
|
|||
POTENTIAL GTH-BLYP-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
CONN_FILE 2H2O.psf
|
||||
CONN_FILE ../sample_psf/2H2O.psf
|
||||
CONNECTIVITY UPSF
|
||||
COORD_FILE 2H2O.pdb
|
||||
COORD_FILE ../sample_pdb/2H2O.pdb
|
||||
COORDINATE pdb
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 80
|
||||
|
|
@ -74,6 +74,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
NOCENTER
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
NOCENTER
|
||||
NOCENTER0
|
||||
&CELL
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -69,6 +69,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME BASIS_SET
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../BASIS_SET
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -24,7 +24,7 @@
|
|||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
parmfile 2H2O.pot
|
||||
parmfile ../sample_pot/2H2O.pot
|
||||
parmtype CHM
|
||||
&spline
|
||||
rcut_nb 5.2917720830
|
||||
|
|
@ -40,13 +40,13 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 7.0 7.0 7.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL GAUSS
|
||||
NOCOMPATIBILITY
|
||||
MM_POTENTIAL_FILE_NAME MM_POTENTIAL
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-14
|
||||
EPS_X 1.0e-14
|
||||
|
|
@ -86,9 +86,9 @@
|
|||
POTENTIAL GTH-BLYP-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
CONN_FILE 2H2O.psf
|
||||
CONN_FILE ../sample_psf/2H2O.psf
|
||||
CONNECTIVITY UPSF
|
||||
COORD_FILE 2H2O.pdb
|
||||
COORD_FILE ../sample_pdb/2H2O.pdb
|
||||
COORDINATE pdb
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 100
|
||||
|
|
@ -68,6 +68,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 7.0 7.0 7.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -69,6 +69,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 6.0 6.0 6.0
|
||||
UNIT ANGSTROM
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME BASIS_SET
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../BASIS_SET
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -20,7 +20,7 @@
|
|||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
parmfile 2H2O.pot
|
||||
parmfile ../sample_pot/2H2O.pot
|
||||
parmtype CHM
|
||||
&spline
|
||||
rcut_nb 5.2917720830
|
||||
|
|
@ -36,13 +36,13 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 7.0 7.0 7.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL NONE
|
||||
NOCOMPATIBILITY
|
||||
MM_POTENTIAL_FILE_NAME MM_POTENTIAL
|
||||
&QM_KIND H
|
||||
MM_INDEX 5 6
|
||||
&END QM_KIND
|
||||
|
|
@ -67,9 +67,9 @@
|
|||
POTENTIAL GTH-BLYP-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
CONN_FILE 2H2O.psf
|
||||
CONN_FILE ../sample_psf/2H2O.psf
|
||||
CONNECTIVITY UPSF
|
||||
COORD_FILE 2H2O.pdb
|
||||
COORD_FILE ../sample_pdb/2H2O.pdb
|
||||
COORDINATE pdb
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
|
|
@ -21,5 +21,3 @@ H2O-qmmm-gauss-14-geep-15.inp 1
|
|||
H2O-qmmm-gauss-14-geep-16.inp 1
|
||||
H2O-qmmm-gauss-14-geep-17.inp 1
|
||||
H2O-qmmm-gauss-14-geep-18.inp 1
|
||||
#constraints
|
||||
water_3_dist.inp 2
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-10.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-10.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 10
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL SILENT
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-11.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-11.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 11
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL SILENT
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-12.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-12.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 12
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-13.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-13.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 13
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-14.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-14.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 14
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-15.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-15.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 15
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-16.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-16.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 16
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-17.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-17.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 17
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-18.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-18.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 18
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-2.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-2.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 2
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-3.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-3.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 3
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-4.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-4.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 4
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-5.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-5.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 5
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-6.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-6.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 6
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-7.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-7.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 7
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-8.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-8.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 8
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-9.inp
Normal file
143
tests/QMMM/QS/regtest-2-swave/H2O-qmmm-gauss-14-geep-9.inp
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
|
||||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 30
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-6
|
||||
EPS_X 1.0e-6
|
||||
MAXITER 100
|
||||
&END INTERPOLATOR
|
||||
&END MGRID
|
||||
&QS
|
||||
&END QS
|
||||
&SCF
|
||||
MAX_SCF 2
|
||||
SCF_GUESS atomic
|
||||
&END SCF
|
||||
&XC
|
||||
&XC_FUNCTIONAL pade
|
||||
&END XC_FUNCTIONAL
|
||||
&END XC
|
||||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
&BEND
|
||||
ATOMS H O H
|
||||
K 0.
|
||||
THETA0 1.8
|
||||
&END BEND
|
||||
&BOND
|
||||
ATOMS O H
|
||||
K 0.
|
||||
R0 1.8
|
||||
&END BOND
|
||||
&CHARGE
|
||||
ATOM O
|
||||
CHARGE -0.8476
|
||||
&END CHARGE
|
||||
&CHARGE
|
||||
ATOM H
|
||||
CHARGE 0.4238
|
||||
&END CHARGE
|
||||
&NONBONDED
|
||||
&LENNARD-JONES
|
||||
atoms O O
|
||||
EPSILON 78.198
|
||||
SIGMA 3.166
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms O H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.6705
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&LENNARD-JONES
|
||||
atoms H H
|
||||
EPSILON 0.0
|
||||
SIGMA 3.30523
|
||||
RCUT 11.4
|
||||
&END LENNARD-JONES
|
||||
&END NONBONDED
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
&EWALD
|
||||
EWALD_TYPE ewald
|
||||
ALPHA .44
|
||||
GMAX 21
|
||||
&END EWALD
|
||||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
&CELL
|
||||
ABC 13.0 13.0 13.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL S-WAVE
|
||||
NOCOMPATIBILITY
|
||||
USE_GEEP_LIB 9
|
||||
&MM_KIND H
|
||||
RADIUS 0.54
|
||||
&END MM_KIND
|
||||
&MM_KIND O
|
||||
RADIUS 0.73
|
||||
&END MM_KIND
|
||||
&PRINT
|
||||
&MM_POTENTIAL
|
||||
&END MM_POTENTIAL
|
||||
&END PRINT
|
||||
&QM_KIND H
|
||||
MM_INDEX 2 3
|
||||
&END QM_KIND
|
||||
&QM_KIND O
|
||||
MM_INDEX 1
|
||||
&END QM_KIND
|
||||
#
|
||||
# QM_KINDS
|
||||
#
|
||||
#
|
||||
# MM_KINDS
|
||||
#
|
||||
#
|
||||
#
|
||||
&END QMMM
|
||||
&SUBSYS
|
||||
&CELL
|
||||
ABC 24.955 24.955 24.955
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
&COORD
|
||||
O 0.000000 0.000000 0.000000 H2O1
|
||||
H 0.000000 0.000000 1.000000 H2O1
|
||||
H 0.942809 0.000000 -0.333333 H2O1
|
||||
O -1.617979 -0.948062 -2.341650 H2O2
|
||||
H -2.529195 -1.296822 -2.122437 H2O2
|
||||
H -1.534288 -0.833088 -3.331486 H2O2
|
||||
O -1.447990 2.117783 1.555094 H2O3
|
||||
H -1.501128 2.645178 2.403050 H2O3
|
||||
H -2.090603 1.352766 1.597519 H2O3
|
||||
&END COORD
|
||||
&KIND H
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q1
|
||||
&END KIND
|
||||
&KIND O
|
||||
BASIS_SET SZV-GTH
|
||||
POTENTIAL GTH-PADE-q6
|
||||
&END KIND
|
||||
&TOPOLOGY
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
&END FORCE_EVAL
|
||||
&GLOBAL
|
||||
FFTLIB FFTSG
|
||||
PRINT_LEVEL MEDIUM
|
||||
|
||||
PROJECT water3
|
||||
RUN_TYPE WFN_OPT
|
||||
&END GLOBAL
|
||||
23
tests/QMMM/QS/regtest-2-swave/TEST_FILES
Normal file
23
tests/QMMM/QS/regtest-2-swave/TEST_FILES
Normal file
|
|
@ -0,0 +1,23 @@
|
|||
# runs are executed in the same order as in this file
|
||||
# the second field tells which test should be run in order to compare with the last available output
|
||||
# e.g. 0 means do not compare anything, running is enough
|
||||
# 1 compares the last total energy in the file
|
||||
# for details see cp2k/tools/do_regtest
|
||||
#GEEP library for S-WAVE expansion
|
||||
H2O-qmmm-gauss-14-geep-2.inp 1
|
||||
H2O-qmmm-gauss-14-geep-3.inp 1
|
||||
H2O-qmmm-gauss-14-geep-4.inp 1
|
||||
H2O-qmmm-gauss-14-geep-5.inp 1
|
||||
H2O-qmmm-gauss-14-geep-6.inp 1
|
||||
H2O-qmmm-gauss-14-geep-7.inp 1
|
||||
H2O-qmmm-gauss-14-geep-8.inp 1
|
||||
H2O-qmmm-gauss-14-geep-9.inp 1
|
||||
H2O-qmmm-gauss-14-geep-10.inp 1
|
||||
H2O-qmmm-gauss-14-geep-11.inp 1
|
||||
H2O-qmmm-gauss-14-geep-12.inp 1
|
||||
H2O-qmmm-gauss-14-geep-13.inp 1
|
||||
H2O-qmmm-gauss-14-geep-14.inp 1
|
||||
H2O-qmmm-gauss-14-geep-15.inp 1
|
||||
H2O-qmmm-gauss-14-geep-16.inp 1
|
||||
H2O-qmmm-gauss-14-geep-17.inp 1
|
||||
H2O-qmmm-gauss-14-geep-18.inp 1
|
||||
0
tests/QMMM/QS/regtest-2-swave/TEST_FILES_RESET
Normal file
0
tests/QMMM/QS/regtest-2-swave/TEST_FILES_RESET
Normal file
18
tests/QMMM/QS/regtest-2-swave/tidy
Normal file
18
tests/QMMM/QS/regtest-2-swave/tidy
Normal file
|
|
@ -0,0 +1,18 @@
|
|||
#!/bin/tcsh
|
||||
# Script to clean files after execution of a test
|
||||
echo "This script will clean the directory" $PWD "from scratch files.."
|
||||
echo
|
||||
foreach file (`cvs update -A -P|grep '? '|awk '{print $2}'`)
|
||||
if ( ${file:e} == 'inp' ) then
|
||||
echo "This files could be a new input file you don't want to be deleted.. Do you really want it deleted?"
|
||||
if ( $1 == "-int" ) then
|
||||
echo "You requested to run the cleaning script interactively! Forget about complains!"
|
||||
rm -f $file
|
||||
else
|
||||
rm -i $file
|
||||
endif
|
||||
else
|
||||
rm -f $file
|
||||
endif
|
||||
end
|
||||
rm -f *.bak
|
||||
|
|
@ -1,8 +0,0 @@
|
|||
ATOM 1 O WAT 1 0.000 0.000 0.000 1.00 0.00 O
|
||||
ATOM 2 H1 WAT 1 0.000 0.000 0.947 1.00 0.00 H
|
||||
ATOM 3 H2 WAT 1 0.896 0.000 -0.317 1.00 0.00 H
|
||||
TER
|
||||
ATOM 4 O WAT 2 -2.114 0.000 -1.712 1.00 0.00 O
|
||||
ATOM 5 H1 WAT 2 -1.449 0.000 -1.034 1.00 0.00 H
|
||||
ATOM 6 H2 WAT 2 -2.975 0.000 -1.311 1.00 0.00 H
|
||||
END
|
||||
|
|
@ -1,76 +0,0 @@
|
|||
*>>>>>>> AMBER FF Converted into CHARMM FF style <<<<<<<
|
||||
*>>>>>>> Generated on :: 20041222 165204.289 +0100 by :: teo <<<<<<<
|
||||
*>>>>>>> Teddy <<<<<<<
|
||||
*>>>>>>> Leap Title :: <<<<<<<
|
||||
*>>>>>>> Send all comments related to the FFs conversion to <<<<<<<
|
||||
*>>>>>>> teodoro.laino@gmail.com <<<<<<<
|
||||
|
||||
BONDS
|
||||
!
|
||||
!V(bond) = Kb(b - b0)**2
|
||||
!
|
||||
!Kb: kcal/mole/A**2
|
||||
!b0: A
|
||||
!
|
||||
!atom type Kb b0
|
||||
!
|
||||
HW OW 553.000000000 0.957200000
|
||||
HW HW 553.000000000 1.513600000
|
||||
|
||||
ANGLES
|
||||
!
|
||||
!V(angle) = Ktheta(Theta - Theta0)**2
|
||||
!
|
||||
!V(Urey-Bradley) = Kub(S - S0)**2
|
||||
!
|
||||
!Ktheta: kcal/mole/rad**2
|
||||
!Theta0: degrees
|
||||
!Kub: kcal/mole/A**2 (Urey-Bradley)
|
||||
!S0: A
|
||||
!
|
||||
!atom types Ktheta Theta0 Kub S0
|
||||
!
|
||||
|
||||
DIHEDRALS
|
||||
!
|
||||
!V(dihedral) = Kchi(1 + cos(n(chi) - delta))
|
||||
!
|
||||
!Kchi: kcal/mole
|
||||
!n: multiplicity
|
||||
!delta: degrees
|
||||
!
|
||||
!atom types Kchi n delta
|
||||
!
|
||||
|
||||
IMPROPER
|
||||
!
|
||||
!V(improper) = Kpsi(psi - psi0)**2
|
||||
!
|
||||
!Kpsi: kcal/mole/rad**2
|
||||
!psi0: degrees
|
||||
!note that the second column of numbers (0) is ignored
|
||||
!
|
||||
!atom types Kpsi psi0
|
||||
!
|
||||
|
||||
NONBONDED
|
||||
!
|
||||
!V(Lennard-Jones) = Eps,i,j[(Rmin,i,j/ri,j)**12 - 2(Rmin,i,j/ri,j)**6]
|
||||
!
|
||||
!epsilon: kcal/mole, Eps,i,j = sqrt(eps,i * eps,j)
|
||||
!Rmin/2: A, Rmin,i,j = Rmin/2,i + Rmin/2,j
|
||||
!
|
||||
!atom ignored epsilon Rmin/2 ignored eps,1-4 Rmin/2,1-4
|
||||
!
|
||||
OW 0.000000000 0.152000000 1.768300000
|
||||
HW 0.000000000 0.000000000 0.000000000
|
||||
|
||||
END
|
||||
|
||||
!
|
||||
! This Section can be cutted & pasted into the Fist input file..
|
||||
!
|
||||
CHARGES
|
||||
OW -0.834000000
|
||||
HW 0.417000000
|
||||
END CHARGES
|
||||
|
|
@ -1,34 +0,0 @@
|
|||
PSF
|
||||
|
||||
1 !NTITLE
|
||||
Conversion from AMBER PARMTOP ::
|
||||
|
||||
6 !NATOM
|
||||
1 MOL1 1 WAT O OW -0.83400 16.00000 0
|
||||
2 MOL1 1 WAT H1 HW 0.41700 1.00800 0
|
||||
3 MOL1 1 WAT H2 HW 0.41700 1.00800 0
|
||||
4 MOL2 2 WAT O OW -0.83400 16.00000 0
|
||||
5 MOL2 2 WAT H1 HW 0.41700 1.00800 0
|
||||
6 MOL2 2 WAT H2 HW 0.41700 1.00800 0
|
||||
|
||||
6 !NBOND
|
||||
3 1 2 1 2 3 6 4
|
||||
5 4 5 6
|
||||
|
||||
0 !NTHETA
|
||||
|
||||
|
||||
0 !NPHI
|
||||
|
||||
|
||||
0 !NIMPHI
|
||||
|
||||
|
||||
0 !NDON
|
||||
|
||||
0 !NACC
|
||||
|
||||
0 !NNB
|
||||
|
||||
0 !NGRP
|
||||
|
||||
File diff suppressed because it is too large
Load diff
|
|
@ -1,38 +0,0 @@
|
|||
REMARK PROTEIN
|
||||
REMARK GENERATED BY BABEL 1.6
|
||||
ATOM 1 CTL3 UND A 1 0.000 0.000 0.000 0.00 -0.27 UND C
|
||||
ATOM 2 HAL3 UND A 1 1.089 0.000 0.000 0.00 0.09 UND H
|
||||
ATOM 3 HAL3 UND A 1 -0.363 1.027 0.000 0.00 0.09 UND H
|
||||
ATOM 4 HAL3 UND A 1 -0.363 -0.513 -0.889 0.00 0.09 UND H
|
||||
ATOM 5 CTL2 UND A 1 -0.483 -0.684 1.184 0.00 -0.18 UND C
|
||||
ATOM 6 HAL2 UND A 1 -0.120 -0.170 2.073 0.00 0.09 UND H
|
||||
ATOM 7 HAL2 UND A 1 -1.572 -0.684 1.184 0.00 0.09 UND H
|
||||
ATOM 8 CTL2 UND A 1 -0.000 -2.051 1.184 0.00 -0.18 UND C
|
||||
ATOM 9 HAL2 UND A 1 1.089 -2.051 1.184 0.00 0.09 UND H
|
||||
ATOM 10 HAL2 UND A 1 -0.363 -2.564 0.295 0.00 0.09 UND H
|
||||
ATOM 11 CTL2 UND A 1 -0.483 -2.734 2.368 0.00 -0.18 UND C
|
||||
ATOM 12 HAL2 UND A 1 -0.120 -3.761 2.368 0.00 0.09 UND H
|
||||
ATOM 13 HAL2 UND A 1 -1.572 -2.734 2.368 0.00 0.09 UND H
|
||||
ATOM 14 CTL2 UND A 1 -0.000 -2.051 3.552 0.00 -0.18 UND C
|
||||
ATOM 15 HAL2 UND A 1 1.089 -2.051 3.552 0.00 0.09 UND H
|
||||
ATOM 16 HAL2 UND A 1 -0.363 -1.024 3.552 0.00 0.09 UND H
|
||||
ATOM 17 CTL2 UND A 1 -0.483 -2.734 4.736 0.00 -0.18 UND C
|
||||
ATOM 18 HAL2 UND A 1 -0.120 -2.221 5.625 0.00 0.09 UND H
|
||||
ATOM 19 HAL2 UND A 1 -1.572 -2.734 4.736 0.00 0.09 UND H
|
||||
ATOM 20 CTL2 UND A 1 -0.000 -4.101 4.736 0.00 -0.18 UND C
|
||||
ATOM 21 HAL2 UND A 1 1.089 -4.101 4.736 0.00 0.09 UND H
|
||||
ATOM 22 HAL2 UND A 1 -0.363 -4.615 3.847 0.00 0.09 UND H
|
||||
ATOM 23 CTL2 UND A 1 -0.483 -4.785 5.920 0.00 -0.18 UND C
|
||||
ATOM 24 HAL2 UND A 1 -0.120 -4.271 6.809 0.00 0.09 UND H
|
||||
ATOM 25 HAL2 UND A 1 -1.572 -4.785 5.920 0.00 0.09 UND H
|
||||
ATOM 26 CTL2 UND A 1 -0.000 -6.152 5.920 0.00 -0.18 UND C
|
||||
ATOM 27 HAL2 UND A 1 1.089 -6.152 5.920 0.00 0.09 UND H
|
||||
ATOM 28 HAL2 UND A 1 -0.363 -6.665 5.030 0.00 0.09 UND H
|
||||
ATOM 29 CTL2 UND A 1 -0.483 -6.835 7.104 0.00 -0.18 UND C
|
||||
ATOM 30 HAL2 UND A 1 -0.120 -6.322 7.993 0.00 0.09 UND H
|
||||
ATOM 31 HAL2 UND A 1 -1.572 -6.835 7.104 0.00 0.09 UND H
|
||||
ATOM 32 CTL3 UND A 1 -0.000 -8.202 7.104 0.00 -0.27 UND C
|
||||
ATOM 33 HAL3 UND A 1 1.089 -8.202 7.104 0.00 0.09 UND H
|
||||
ATOM 34 HAL3 UND A 1 -0.336 -8.678 7.927 0.00 0.09 UND H
|
||||
ATOM 35 HAL3 UND A 1 -0.363 -8.716 6.214 0.00 0.09 UND H
|
||||
END
|
||||
|
|
@ -1,27 +0,0 @@
|
|||
################################################################################
|
||||
#
|
||||
# Potential data base file for CP2K (Quickstep)
|
||||
#
|
||||
# History: - Creation (12.12.1999, Matthias Krack)
|
||||
# - Electronic configurations added (11.05.2000,MK)
|
||||
# - GTH-PP for first-row transition metal added (18.03.2003,MK)
|
||||
# - Automatic update (16.12.2003,MK)
|
||||
#
|
||||
################################################################################
|
||||
################################################################################
|
||||
#
|
||||
# PADE functional
|
||||
# ANTYMATTER -> inverts the sign of the core charge
|
||||
#
|
||||
################################################################################
|
||||
#
|
||||
NA GTH-P-NOEL
|
||||
1
|
||||
0.75000000 2 -4.18023680 0.72507482
|
||||
0
|
||||
#
|
||||
CL GTH-M-NOEL
|
||||
-1
|
||||
0.75000000 2 -4.18023680 0.72507482
|
||||
0
|
||||
#
|
||||
File diff suppressed because it is too large
Load diff
|
|
@ -1,36 +0,0 @@
|
|||
&MM_FIT_POT
|
||||
RADIUS 0.44 Angstrom
|
||||
7
|
||||
0.230734 1.45439 Bohr
|
||||
0.270339 1.09485 Bohr
|
||||
0.0758554 4.90671 Bohr
|
||||
0.190667 0.883485 Bohr
|
||||
0.17373 1.96564 Bohr
|
||||
0.127689 2.65816 Bohr
|
||||
0.0951041 3.59164 Bohr
|
||||
&END
|
||||
|
||||
&MM_FIT_POT
|
||||
RADIUS 0.78 Angstrom
|
||||
7
|
||||
0.0659236 1.52746 Bohr
|
||||
0.112021 1.74891 Bohr
|
||||
0.0648734 4.29703 Bohr
|
||||
0.0797339 3.37316 Bohr
|
||||
0.0978985 2.66634 Bohr
|
||||
0.113883 2.13022 Bohr
|
||||
0.056382 5.56571 Bohr
|
||||
&END
|
||||
|
||||
&MM_FIT_POT
|
||||
RADIUS 0.80 Angstrom
|
||||
7
|
||||
0.0627435 1.56521 Bohr
|
||||
0.1100120 2.16821 Bohr
|
||||
0.0951723 2.70465 Bohr
|
||||
0.0779049 3.41131 Bohr
|
||||
0.0555558 5.59989 Bohr
|
||||
0.0636588 4.33400 Bohr
|
||||
0.1073780 1.78665 Bohr
|
||||
&END
|
||||
|
||||
File diff suppressed because it is too large
Load diff
|
|
@ -1,15 +0,0 @@
|
|||
REMARK IDENTICAL COORDS used for PINY test
|
||||
ATOM 1 CTL3 BUT A 1 0.496 -3.633 0.319 0.00 -0.27 BUT C
|
||||
ATOM 2 HAL3 BUT A 1 1.524 -3.902 0.396 0.00 0.09 BUT H
|
||||
ATOM 3 HAL3 BUT A 1 0.052 -3.962 -0.551 0.00 0.09 BUT H
|
||||
ATOM 4 HAL3 BUT A 1 -0.071 -4.118 1.011 0.00 0.09 BUT H
|
||||
ATOM 5 CTL2 BUT A 1 0.338 -2.099 0.495 0.00 -0.18 BUT C
|
||||
ATOM 6 HAL2 BUT A 1 -0.556 -1.833 1.098 0.00 0.09 BUT H
|
||||
ATOM 7 HAL2 BUT A 1 0.318 -1.614 -0.429 0.00 0.09 BUT H
|
||||
ATOM 8 CTL2 BUT A 1 1.495 -1.584 1.361 0.00 -0.18 BUT C
|
||||
ATOM 9 HAL2 BUT A 1 2.155 -2.316 1.673 0.00 0.09 BUT H
|
||||
ATOM 10 HAL2 BUT A 1 0.976 -1.074 2.180 0.00 0.09 BUT H
|
||||
ATOM 11 CTL3 BUT A 1 2.291 -0.530 0.620 0.00 -0.27 BUT C
|
||||
ATOM 12 HAL3 BUT A 1 3.321 -0.690 0.771 0.00 0.09 BUT H
|
||||
ATOM 13 HAL3 BUT A 1 1.996 0.440 0.940 0.00 0.09 BUT H
|
||||
ATOM 14 HAL3 BUT A 1 2.068 -0.644 -0.402 0.00 0.09 BUT H
|
||||
|
|
@ -1,44 +0,0 @@
|
|||
|
||||
BONDS
|
||||
CTL2 HAL2 309.00 1.111 ! alkanes, 4/98
|
||||
CTL3 HAL3 322.00 1.111 ! alkanes, 4/98
|
||||
CTL2 CTL2 222.500 1.530 ! alkanes, 3/92
|
||||
CTL2 CTL3 222.500 1.528 ! alkanes, 3/92
|
||||
|
||||
ANGLES
|
||||
HAL2 CTL2 HAL2 35.500 109.00 5.40 1.80200 ! alkane, 3/92
|
||||
HAL3 CTL3 HAL3 35.500 108.40 5.40 1.80200 ! alkane, 3/92
|
||||
HAL3 CTL3 HAL3 35.500 108.40 5.40 1.80200 ! alkane, 3/92
|
||||
HAL2 CTL2 CTL3 34.600 110.10 22.53 2.179 ! alkane, 4/98
|
||||
CTL2 CTL2 CTL3 58.000 115.00 8.00 2.561 ! alkane, 3/92
|
||||
CTL2 CTL2 CTL2 58.000 115.00 8.00 2.561 ! alkane, 3/92
|
||||
HAL3 CTL3 CTL2 34.600 110.10 22.53 2.179 ! alkane, 4/98
|
||||
HAL2 CTL2 CTL2 26.500 110.10 22.53 2.179 ! alkane, 4/98
|
||||
|
||||
DIHEDRALS
|
||||
CTL3 CTL2 CTL2 CTL3 0.10 2 180.00 ! alkane, 4/98, adm jr., lower butane gauche conformer
|
||||
CTL3 CTL2 CTL2 CTL3 0.15 4 0.00 ! alkane, 4/98, adm jr.
|
||||
CTL3 CTL2 CTL2 CTL3 0.10 6 180.00 ! alkane, 4/98, adm jr.
|
||||
CTL2 CTL2 CTL2 CTL2 0.10 2 180.00 ! alkane, 4/98, adm jr., lower butane gauche conformer
|
||||
CTL2 CTL2 CTL2 CTL2 0.15 4 0.00 ! alkane, 4/98, adm jr.
|
||||
CTL2 CTL2 CTL2 CTL2 0.10 6 180.00 ! alkane, 4/98, adm jr.
|
||||
CTL3 CTL2 CTL2 CTL2 0.10 2 180.00 ! alkane, 4/98, adm jr., lower butane gauche conformer
|
||||
CTL3 CTL2 CTL2 CTL2 0.15 4 0.00 ! alkane, 4/98, adm jr.
|
||||
CTL3 CTL2 CTL2 CTL2 0.10 6 180.00 ! alkane, 4/98, adm jr.
|
||||
HAL2 CTL2 CTL3 HAL3 0.1600 3 0.00 ! alkane, 4/98, yin and mackerell
|
||||
CTL2 CTL2 CTL3 HAL3 0.1600 3 0.00 ! alkane, 4/98, yin and mackerell
|
||||
CTL3 CTL2 CTL2 HAL2 0.1900 3 0.00 ! alkane, 4/98, yin and mackerell
|
||||
CTL2 CTL2 CTL2 HAL2 0.1900 3 0.00 ! alkane, 4/98, yin and mackerell
|
||||
HAL2 CTL2 CTL2 HAL2 0.1900 3 0.00 ! alkane, 4/98, yin and mackerell
|
||||
|
||||
IMPROPER
|
||||
|
||||
NONBONDED
|
||||
HAL2 0.0 -0.028 1.3400 ! alkane, yin and mackerell, 4/98
|
||||
HAL3 0.0 -0.024 1.3400 ! alkane, yin and mackerell, 4/98
|
||||
CTL2 0.0 -0.0560 2.010 0.0 -0.01 1.9 ! alkane, 4/98, yin, adm jr.
|
||||
CTL3 0.0 -0.0780 2.040 0.0 -0.01 1.9 ! alkane, 4/98, yin, adm jr.
|
||||
|
||||
HBOND CUTHB 0.5
|
||||
|
||||
END
|
||||
|
|
@ -1,186 +0,0 @@
|
|||
PSF
|
||||
|
||||
1 !NTITLE
|
||||
Conversion from AMBER PARMTOP ::
|
||||
|
||||
164 !NATOM
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
1 MOL1 1 SIL SI SI 2.40000 28.08550 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
6 MOL6 1 OZX OZ OZ -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
2 MOL2 1 OXX O O -1.20000 16.00000 0
|
||||
3 MOL3 1 HX1 H1 H1 -0.47708 1.00800 0
|
||||
3 MOL3 1 HX1 H1 H1 -0.47708 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
3 MOL3 1 HX1 H1 H1 -0.47708 1.00800 0
|
||||
3 MOL3 1 HX1 H1 H1 -0.47708 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
3 MOL3 1 HX1 H1 H1 -0.47708 1.00800 0
|
||||
3 MOL3 1 HX1 H1 H1 -0.47708 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
3 MOL3 1 HX1 H1 H1 -0.47708 1.00800 0
|
||||
3 MOL3 1 HX1 H1 H1 -0.47708 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
3 MOL3 1 HX1 H1 H1 -0.47708 1.00800 0
|
||||
3 MOL3 1 HX1 H1 H1 -0.47708 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
4 MOL4 1 HX2 H2 H2 -0.48520 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
5 MOL5 1 HX3 H3 H3 0.48151 1.00800 0
|
||||
|
||||
0 !NBOND
|
||||
|
||||
0 !NTHETA
|
||||
|
||||
0 !NPHI
|
||||
|
||||
0 !NIMPHI
|
||||
|
||||
0 !NDON
|
||||
|
||||
0 !NACC
|
||||
|
||||
0 !NNB
|
||||
|
||||
0 !NGRP
|
||||
|
|
@ -1,8 +0,0 @@
|
|||
ATOM 1 O WAT 1 0.000 0.000 0.000 1.00 0.00 O
|
||||
ATOM 2 H1 WAT 1 0.000 0.000 0.947 1.00 0.00 H
|
||||
ATOM 3 H2 WAT 1 0.896 0.000 -0.317 1.00 0.00 H
|
||||
TER
|
||||
ATOM 4 O WAT 2 -2.114 0.000 -1.712 1.00 0.00 O
|
||||
ATOM 5 H1 WAT 2 -1.449 0.000 -1.034 1.00 0.00 H
|
||||
ATOM 6 H2 WAT 2 -2.975 0.000 -1.311 1.00 0.00 H
|
||||
END
|
||||
|
|
@ -1,76 +0,0 @@
|
|||
*>>>>>>> AMBER FF Converted into CHARMM FF style <<<<<<<
|
||||
*>>>>>>> Generated on :: 20041222 165204.289 +0100 by :: teo <<<<<<<
|
||||
*>>>>>>> Teddy <<<<<<<
|
||||
*>>>>>>> Leap Title :: <<<<<<<
|
||||
*>>>>>>> Send all comments related to the FFs conversion to <<<<<<<
|
||||
*>>>>>>> teodoro.laino@gmail.com <<<<<<<
|
||||
|
||||
BONDS
|
||||
!
|
||||
!V(bond) = Kb(b - b0)**2
|
||||
!
|
||||
!Kb: kcal/mole/A**2
|
||||
!b0: A
|
||||
!
|
||||
!atom type Kb b0
|
||||
!
|
||||
HW OW 553.000000000 0.957200000
|
||||
HW HW 553.000000000 1.513600000
|
||||
|
||||
ANGLES
|
||||
!
|
||||
!V(angle) = Ktheta(Theta - Theta0)**2
|
||||
!
|
||||
!V(Urey-Bradley) = Kub(S - S0)**2
|
||||
!
|
||||
!Ktheta: kcal/mole/rad**2
|
||||
!Theta0: degrees
|
||||
!Kub: kcal/mole/A**2 (Urey-Bradley)
|
||||
!S0: A
|
||||
!
|
||||
!atom types Ktheta Theta0 Kub S0
|
||||
!
|
||||
|
||||
DIHEDRALS
|
||||
!
|
||||
!V(dihedral) = Kchi(1 + cos(n(chi) - delta))
|
||||
!
|
||||
!Kchi: kcal/mole
|
||||
!n: multiplicity
|
||||
!delta: degrees
|
||||
!
|
||||
!atom types Kchi n delta
|
||||
!
|
||||
|
||||
IMPROPER
|
||||
!
|
||||
!V(improper) = Kpsi(psi - psi0)**2
|
||||
!
|
||||
!Kpsi: kcal/mole/rad**2
|
||||
!psi0: degrees
|
||||
!note that the second column of numbers (0) is ignored
|
||||
!
|
||||
!atom types Kpsi psi0
|
||||
!
|
||||
|
||||
NONBONDED
|
||||
!
|
||||
!V(Lennard-Jones) = Eps,i,j[(Rmin,i,j/ri,j)**12 - 2(Rmin,i,j/ri,j)**6]
|
||||
!
|
||||
!epsilon: kcal/mole, Eps,i,j = sqrt(eps,i * eps,j)
|
||||
!Rmin/2: A, Rmin,i,j = Rmin/2,i + Rmin/2,j
|
||||
!
|
||||
!atom ignored epsilon Rmin/2 ignored eps,1-4 Rmin/2,1-4
|
||||
!
|
||||
OW 0.000000000 0.152000000 1.768300000
|
||||
HW 0.000000000 0.000000000 0.000000000
|
||||
|
||||
END
|
||||
|
||||
!
|
||||
! This Section can be cutted & pasted into the Fist input file..
|
||||
!
|
||||
CHARGES
|
||||
OW -0.834000000
|
||||
HW 0.417000000
|
||||
END CHARGES
|
||||
|
|
@ -1,34 +0,0 @@
|
|||
PSF
|
||||
|
||||
1 !NTITLE
|
||||
Conversion from AMBER PARMTOP ::
|
||||
|
||||
6 !NATOM
|
||||
1 MOL1 1 WAT O OW -0.83400 16.00000 0
|
||||
2 MOL1 1 WAT H1 HW 0.41700 1.00800 0
|
||||
3 MOL1 1 WAT H2 HW 0.41700 1.00800 0
|
||||
4 MOL2 2 WAT O OW -0.83400 16.00000 0
|
||||
5 MOL2 2 WAT H1 HW 0.41700 1.00800 0
|
||||
6 MOL2 2 WAT H2 HW 0.41700 1.00800 0
|
||||
|
||||
6 !NBOND
|
||||
3 1 2 1 2 3 6 4
|
||||
5 4 5 6
|
||||
|
||||
0 !NTHETA
|
||||
|
||||
|
||||
0 !NPHI
|
||||
|
||||
|
||||
0 !NIMPHI
|
||||
|
||||
|
||||
0 !NDON
|
||||
|
||||
0 !NACC
|
||||
|
||||
0 !NNB
|
||||
|
||||
0 !NGRP
|
||||
|
||||
File diff suppressed because it is too large
Load diff
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -20,7 +20,7 @@
|
|||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
parmfile butane.pot
|
||||
parmfile ../sample_pot/butane.pot
|
||||
parmtype CHM
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
|
|
@ -33,13 +33,13 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 10.0 10.0 10.0
|
||||
UNIT ANGSTROM
|
||||
&END CELL
|
||||
ECOUPL GAUSS
|
||||
NOCOMPATIBILITY
|
||||
MM_POTENTIAL_FILE_NAME MM_POTENTIAL
|
||||
&INTERPOLATOR
|
||||
EPS_R 1.0e-14
|
||||
EPS_X 1.0e-14
|
||||
|
|
@ -107,7 +107,7 @@
|
|||
&END KIND
|
||||
&TOPOLOGY
|
||||
CHARGE_BETA
|
||||
COORD_FILE C11H24.pdb
|
||||
COORD_FILE ../sample_pdb/C11H24.pdb
|
||||
COORDINATE pdb
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
|
|
|
|||
|
|
@ -1,38 +0,0 @@
|
|||
REMARK PROTEIN
|
||||
REMARK GENERATED BY BABEL 1.6
|
||||
ATOM 1 CTL3 UND A 1 0.000 0.000 0.000 0.00 -0.27 UND C
|
||||
ATOM 2 HAL3 UND A 1 1.089 0.000 0.000 0.00 0.09 UND H
|
||||
ATOM 3 HAL3 UND A 1 -0.363 1.027 0.000 0.00 0.09 UND H
|
||||
ATOM 4 HAL3 UND A 1 -0.363 -0.513 -0.889 0.00 0.09 UND H
|
||||
ATOM 5 CTL2 UND A 1 -0.483 -0.684 1.184 0.00 -0.18 UND C
|
||||
ATOM 6 HAL2 UND A 1 -0.120 -0.170 2.073 0.00 0.09 UND H
|
||||
ATOM 7 HAL2 UND A 1 -1.572 -0.684 1.184 0.00 0.09 UND H
|
||||
ATOM 8 CTL2 UND A 1 -0.000 -2.051 1.184 0.00 -0.18 UND C
|
||||
ATOM 9 HAL2 UND A 1 1.089 -2.051 1.184 0.00 0.09 UND H
|
||||
ATOM 10 HAL2 UND A 1 -0.363 -2.564 0.295 0.00 0.09 UND H
|
||||
ATOM 11 CTL2 UND A 1 -0.483 -2.734 2.368 0.00 -0.18 UND C
|
||||
ATOM 12 HAL2 UND A 1 -0.120 -3.761 2.368 0.00 0.09 UND H
|
||||
ATOM 13 HAL2 UND A 1 -1.572 -2.734 2.368 0.00 0.09 UND H
|
||||
ATOM 14 CTL2 UND A 1 -0.000 -2.051 3.552 0.00 -0.18 UND C
|
||||
ATOM 15 HAL2 UND A 1 1.089 -2.051 3.552 0.00 0.09 UND H
|
||||
ATOM 16 HAL2 UND A 1 -0.363 -1.024 3.552 0.00 0.09 UND H
|
||||
ATOM 17 CTL2 UND A 1 -0.483 -2.734 4.736 0.00 -0.18 UND C
|
||||
ATOM 18 HAL2 UND A 1 -0.120 -2.221 5.625 0.00 0.09 UND H
|
||||
ATOM 19 HAL2 UND A 1 -1.572 -2.734 4.736 0.00 0.09 UND H
|
||||
ATOM 20 CTL2 UND A 1 -0.000 -4.101 4.736 0.00 -0.18 UND C
|
||||
ATOM 21 HAL2 UND A 1 1.089 -4.101 4.736 0.00 0.09 UND H
|
||||
ATOM 22 HAL2 UND A 1 -0.363 -4.615 3.847 0.00 0.09 UND H
|
||||
ATOM 23 CTL2 UND A 1 -0.483 -4.785 5.920 0.00 -0.18 UND C
|
||||
ATOM 24 HAL2 UND A 1 -0.120 -4.271 6.809 0.00 0.09 UND H
|
||||
ATOM 25 HAL2 UND A 1 -1.572 -4.785 5.920 0.00 0.09 UND H
|
||||
ATOM 26 CTL2 UND A 1 -0.000 -6.152 5.920 0.00 -0.18 UND C
|
||||
ATOM 27 HAL2 UND A 1 1.089 -6.152 5.920 0.00 0.09 UND H
|
||||
ATOM 28 HAL2 UND A 1 -0.363 -6.665 5.030 0.00 0.09 UND H
|
||||
ATOM 29 CTL2 UND A 1 -0.483 -6.835 7.104 0.00 -0.18 UND C
|
||||
ATOM 30 HAL2 UND A 1 -0.120 -6.322 7.993 0.00 0.09 UND H
|
||||
ATOM 31 HAL2 UND A 1 -1.572 -6.835 7.104 0.00 0.09 UND H
|
||||
ATOM 32 CTL3 UND A 1 -0.000 -8.202 7.104 0.00 -0.27 UND C
|
||||
ATOM 33 HAL3 UND A 1 1.089 -8.202 7.104 0.00 0.09 UND H
|
||||
ATOM 34 HAL3 UND A 1 -0.336 -8.678 7.927 0.00 0.09 UND H
|
||||
ATOM 35 HAL3 UND A 1 -0.363 -8.716 6.214 0.00 0.09 UND H
|
||||
END
|
||||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QS
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
|
|||
|
|
@ -2,8 +2,8 @@
|
|||
&FORCE_EVAL
|
||||
METHOD QMMM
|
||||
&DFT
|
||||
BASIS_SET_FILE_NAME GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME POTENTIAL
|
||||
BASIS_SET_FILE_NAME ../GTH_BASIS_SETS
|
||||
POTENTIAL_FILE_NAME ../POTENTIAL
|
||||
&MGRID
|
||||
COMMENSURATE
|
||||
CUTOFF 50
|
||||
|
|
@ -20,7 +20,7 @@
|
|||
&END DFT
|
||||
&MM
|
||||
&FORCEFIELD
|
||||
parmfile butane.pot
|
||||
parmfile ../sample_pot/butane.pot
|
||||
parmtype CHM
|
||||
&END FORCEFIELD
|
||||
&POISSON
|
||||
|
|
@ -33,6 +33,7 @@
|
|||
&END POISSON
|
||||
&END MM
|
||||
&QMMM
|
||||
MM_POTENTIAL_FILE_NAME ../MM_POTENTIAL
|
||||
&CELL
|
||||
ABC 7.0 7.0 7.0
|
||||
UNIT ANGSTROM
|
||||
|
|
@ -82,7 +83,7 @@
|
|||
&END KIND
|
||||
&TOPOLOGY
|
||||
CHARGE_BETA
|
||||
COORD_FILE butane.pdb
|
||||
COORD_FILE ../sample_pdb/butane.pdb
|
||||
COORDINATE pdb
|
||||
&END TOPOLOGY
|
||||
&END SUBSYS
|
||||
|
|
|
|||
Some files were not shown because too many files have changed in this diff Show more
Loading…
Add table
Add a link
Reference in a new issue