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Merge remote-tracking branch 'upstream/develop' into endf66

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Adam Nelson 2014-01-18 06:31:10 -05:00
commit 1431196676
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4
docs/source/usersguide/install.rst
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@ -78,7 +78,7 @@ Prerequisites
./configure --prefix=/opt/hdf5/1.8.11-gnu --enable-fortran \
--enable-fortran2003 --enable-parallel
You may omit '--enable-parallel' if you want to compile HDF5_ in serial.
You may omit ``--enable-parallel`` if you want to compile HDF5_ in serial.
* PETSc_ for CMFD acceleration
@ -93,7 +93,7 @@ Prerequisites
--with-fortran-datatypes
The BLAS/LAPACK library is not required to be downloaded and can be linked
explicitly (e.g., Intel MLK library).
explicitly (e.g., Intel MKL library).
* git_ version control software for obtaining source code

12
docs/source/usersguide/processing.rst
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@ -38,7 +38,7 @@ running OpenMC with the -plot or -p command-line option (See
Plotting in 2D
--------------
.. image:: ../../img/atr.png
.. image:: ../_images/atr.png
:height: 200px
After running OpenMC to obtain PPM files, images should be saved to another
@ -58,7 +58,7 @@ Ubuntu: ``sudo apt-get install imagemagick``). Images are then converted like:
Plotting in 3D
--------------
.. image:: ../../img/3dgeomplot.png
.. image:: ../_images/3dgeomplot.png
:height: 200px
The binary VOXEL files output by OpenMC can not be viewed directly by any
@ -162,7 +162,7 @@ tasks will be described here in the following sections.
Plotting in 2D
--------------
.. image:: ../../img/plotmeshtally.png
.. image:: ../_images/plotmeshtally.png
:height: 200px
For simple viewing of 2D slices of a mesh plot, the utility plot_mesh_tally.py
@ -170,7 +170,7 @@ is provided. This utility provides an interactive GUI to explore and plot
mesh tallies for any scores and filter bins. It requires statepoint.py, as well
as `PyQt <http://www.riverbankcomputing.com/software/pyqt>`_.
.. image:: ../../img/fluxplot.png
.. image:: ../_images/fluxplot.png
:height: 200px
Alternatively, the user can write their own Python script to manipulate the data
@ -249,7 +249,7 @@ two heatmaps in the previous figure.
Plotting in 3D
--------------
.. image:: ../../img/3dcore.png
.. image:: ../_images/3dcore.png
:height: 200px
As with 3D plots of the geometry, meshtally data needs to be put into a standard
@ -357,7 +357,7 @@ and dumped to MATLAB in one step.
Particle Track Visualization
----------------------------
.. image:: ../../img/Tracks.png
.. image:: ../_images/Tracks.png
:height: 200px
OpenMC can dump particle tracks—the position of particles as they are