Apply clang-format on entire source

This commit is contained in:
Paul Romano 2021-08-11 11:41:49 -05:00
parent 4c17061a1d
commit 1bc2bd8460
181 changed files with 7372 additions and 6952 deletions

View file

@ -1,8 +1,8 @@
#include "openmc/scattdata.h"
#include <algorithm>
#include <numeric>
#include <cmath>
#include <numeric>
#include "xtensor/xbuilder.hpp"
#include "xtensor/xview.hpp"
@ -19,10 +19,9 @@ namespace openmc {
// ScattData base-class methods
//==============================================================================
void
ScattData::base_init(int order, const xt::xtensor<int, 1>& in_gmin,
const xt::xtensor<int, 1>& in_gmax, const double_2dvec& in_energy,
const double_2dvec& in_mult)
void ScattData::base_init(int order, const xt::xtensor<int, 1>& in_gmin,
const xt::xtensor<int, 1>& in_gmax, const double_2dvec& in_energy,
const double_2dvec& in_mult)
{
size_t groups = in_energy.size();
@ -48,8 +47,9 @@ ScattData::base_init(int order, const xt::xtensor<int, 1>& in_gmin,
if (num_converted > 0) {
// Raise a warning to the user if we did have to do the conversion
std::string msg = std::to_string(num_converted) +
"entries in the Multiplicity Matrix were changed from 0 to 1";
std::string msg =
std::to_string(num_converted) +
"entries in the Multiplicity Matrix were changed from 0 to 1";
warning(msg);
}
@ -57,7 +57,8 @@ ScattData::base_init(int order, const xt::xtensor<int, 1>& in_gmin,
double norm = std::accumulate(energy[gin].begin(), energy[gin].end(), 0.);
if (norm != 0.) {
for (auto& n : energy[gin]) n /= norm;
for (auto& n : energy[gin])
n /= norm;
}
// Initialize the distribution data
@ -75,7 +76,7 @@ void ScattData::base_combine(size_t max_order, size_t order_dim,
xt::xtensor<int, 1>& in_gmin, xt::xtensor<int, 1>& in_gmax,
double_2dvec& sparse_mult, double_3dvec& sparse_scatter)
{
size_t groups = those_scatts[0] -> energy.size();
size_t groups = those_scatts[0]->energy.size();
// Now allocate and zero our storage spaces
xt::xtensor<double, 3> this_nuscatt_matrix({groups, groups, order_dim}, 0.);
@ -97,10 +98,9 @@ void ScattData::base_combine(size_t max_order, size_t order_dim,
for (int gin = 0; gin < groups; gin++) {
for (int go = 0; go < groups; go++) {
this_nuscatt_P0(gin, go) +=
scalars[i] * that->get_xs(MgxsType::NU_SCATTER, gin, &go, nullptr);
scalars[i] * that->get_xs(MgxsType::NU_SCATTER, gin, &go, nullptr);
this_scatt_P0(gin, go) +=
scalars[i] *
that->get_xs(MgxsType::SCATTER, gin, &go, nullptr);
scalars[i] * that->get_xs(MgxsType::SCATTER, gin, &go, nullptr);
}
}
}
@ -122,7 +122,8 @@ void ScattData::base_combine(size_t max_order, size_t order_dim,
break;
}
}
if (non_zero) break;
if (non_zero)
break;
}
int gmax_;
for (gmax_ = groups - 1; gmax_ >= 0; gmax_--) {
@ -133,7 +134,8 @@ void ScattData::base_combine(size_t max_order, size_t order_dim,
break;
}
}
if (non_zero) break;
if (non_zero)
break;
}
// treat the case of all values being 0
@ -161,11 +163,9 @@ void ScattData::base_combine(size_t max_order, size_t order_dim,
}
}
//==============================================================================
void
ScattData::sample_energy(int gin, int& gout, int& i_gout, uint64_t* seed)
void ScattData::sample_energy(int gin, int& gout, int& i_gout, uint64_t* seed)
{
// Sample the outgoing group
double xi = prn(seed);
@ -173,15 +173,16 @@ ScattData::sample_energy(int gin, int& gout, int& i_gout, uint64_t* seed)
i_gout = 0;
for (gout = gmin[gin]; gout < gmax[gin]; ++gout) {
prob += energy[gin][i_gout];
if (xi < prob) break;
if (xi < prob)
break;
++i_gout;
}
}
//==============================================================================
double
ScattData::get_xs(MgxsType xstype, int gin, const int* gout, const double* mu)
double ScattData::get_xs(
MgxsType xstype, int gin, const int* gout, const double* mu)
{
// Set the outgoing group offset index as needed
int i_gout = 0;
@ -195,16 +196,17 @@ ScattData::get_xs(MgxsType xstype, int gin, const int* gout, const double* mu)
}
double val = scattxs[gin];
switch(xstype) {
switch (xstype) {
case MgxsType::NU_SCATTER:
if (gout != nullptr) val *= energy[gin][i_gout];
if (gout != nullptr)
val *= energy[gin][i_gout];
break;
case MgxsType::SCATTER:
if (gout != nullptr) {
val *= energy[gin][i_gout] / mult[gin][i_gout];
} else {
val /= std::inner_product(mult[gin].begin(), mult[gin].end(),
energy[gin].begin(), 0.0);
val /= std::inner_product(
mult[gin].begin(), mult[gin].end(), energy[gin].begin(), 0.0);
}
break;
case MgxsType::NU_SCATTER_FMU:
@ -235,10 +237,9 @@ ScattData::get_xs(MgxsType xstype, int gin, const int* gout, const double* mu)
// ScattDataLegendre methods
//==============================================================================
void
ScattDataLegendre::init(const xt::xtensor<int, 1>& in_gmin,
const xt::xtensor<int, 1>& in_gmax, const double_2dvec& in_mult,
const double_3dvec& coeffs)
void ScattDataLegendre::init(const xt::xtensor<int, 1>& in_gmin,
const xt::xtensor<int, 1>& in_gmax, const double_2dvec& in_mult,
const double_3dvec& coeffs)
{
size_t groups = coeffs.size();
size_t order = coeffs[0][0].size();
@ -268,7 +269,8 @@ ScattDataLegendre::init(const xt::xtensor<int, 1>& in_gmin,
double norm = matrix[gin][i_gout][0];
in_energy[gin][i_gout] = norm;
if (norm != 0.) {
for (auto& n : matrix[gin][i_gout]) n /= norm;
for (auto& n : matrix[gin][i_gout])
n /= norm;
}
}
}
@ -284,7 +286,8 @@ ScattDataLegendre::init(const xt::xtensor<int, 1>& in_gmin,
dist[gin][i_gout] = matrix[gin][i_gout];
}
max_val[gin].resize(num_groups);
for (auto& n : max_val[gin]) n = 0.;
for (auto& n : max_val[gin])
n = 0.;
}
// Now update the maximum value
@ -293,8 +296,7 @@ ScattDataLegendre::init(const xt::xtensor<int, 1>& in_gmin,
//==============================================================================
void
ScattDataLegendre::update_max_val()
void ScattDataLegendre::update_max_val()
{
size_t groups = max_val.size();
// Step through the polynomial with fixed number of points to identify the
@ -315,11 +317,12 @@ ScattDataLegendre::update_max_val()
}
// Calculate probability
double f = evaluate_legendre(dist[gin][i_gout].size() - 1,
dist[gin][i_gout].data(), mu);
double f = evaluate_legendre(
dist[gin][i_gout].size() - 1, dist[gin][i_gout].data(), mu);
// if this is a new maximum, store it
if (f > max_val[gin][i_gout]) max_val[gin][i_gout] = f;
if (f > max_val[gin][i_gout])
max_val[gin][i_gout] = f;
} // end imu loop
// Since we may not have caught the true max, add 10% margin
@ -330,25 +333,23 @@ ScattDataLegendre::update_max_val()
//==============================================================================
double
ScattDataLegendre::calc_f(int gin, int gout, double mu)
double ScattDataLegendre::calc_f(int gin, int gout, double mu)
{
double f;
if ((gout < gmin[gin]) || (gout > gmax[gin])) {
f = 0.;
} else {
int i_gout = gout - gmin[gin];
f = evaluate_legendre(dist[gin][i_gout].size() - 1,
dist[gin][i_gout].data(), mu);
f = evaluate_legendre(
dist[gin][i_gout].size() - 1, dist[gin][i_gout].data(), mu);
}
return f;
}
//==============================================================================
void
ScattDataLegendre::sample(int gin, int& gout, double& mu, double& wgt,
uint64_t* seed)
void ScattDataLegendre::sample(
int gin, int& gout, double& mu, double& wgt, uint64_t* seed)
{
// Sample the outgoing energy using the base-class method
int i_gout;
@ -363,7 +364,8 @@ ScattDataLegendre::sample(int gin, int& gout, double& mu, double& wgt,
double f = calc_f(gin, gout, mu);
if (f > 0.) {
double u = prn(seed) * M;
if (u <= f) break;
if (u <= f)
break;
}
}
if (samples == MAX_SAMPLE) {
@ -388,10 +390,11 @@ void ScattDataLegendre::combine(
fatal_error("Cannot combine the ScattData objects!");
}
size_t that_order = that->get_order();
if (that_order > max_order) max_order = that_order;
if (that_order > max_order)
max_order = that_order;
}
size_t groups = those_scatts[0] -> energy.size();
size_t groups = those_scatts[0]->energy.size();
xt::xtensor<int, 1> in_gmin({groups}, 0);
xt::xtensor<int, 1> in_gmax({groups}, 0);
@ -403,7 +406,7 @@ void ScattDataLegendre::combine(
// matrices
size_t order_dim = max_order + 1;
ScattData::base_combine(max_order, order_dim, those_scatts, scalars, in_gmin,
in_gmax, sparse_mult, sparse_scatter);
in_gmax, sparse_mult, sparse_scatter);
// Got everything we need, store it.
init(in_gmin, in_gmax, sparse_mult, sparse_scatter);
@ -411,8 +414,7 @@ void ScattDataLegendre::combine(
//==============================================================================
xt::xtensor<double, 3>
ScattDataLegendre::get_matrix(size_t max_order)
xt::xtensor<double, 3> ScattDataLegendre::get_matrix(size_t max_order)
{
// Get the sizes and initialize the data to 0
size_t groups = energy.size();
@ -423,8 +425,8 @@ ScattDataLegendre::get_matrix(size_t max_order)
for (int i_gout = 0; i_gout < energy[gin].size(); i_gout++) {
int gout = i_gout + gmin[gin];
for (int l = 0; l < order_dim; l++) {
matrix(gin, gout, l) = scattxs[gin] * energy[gin][i_gout] *
dist[gin][i_gout][l];
matrix(gin, gout, l) =
scattxs[gin] * energy[gin][i_gout] * dist[gin][i_gout][l];
}
}
}
@ -435,10 +437,9 @@ ScattDataLegendre::get_matrix(size_t max_order)
// ScattDataHistogram methods
//==============================================================================
void
ScattDataHistogram::init(const xt::xtensor<int, 1>& in_gmin,
const xt::xtensor<int, 1>& in_gmax, const double_2dvec& in_mult,
const double_3dvec& coeffs)
void ScattDataHistogram::init(const xt::xtensor<int, 1>& in_gmin,
const xt::xtensor<int, 1>& in_gmax, const double_2dvec& in_mult,
const double_3dvec& coeffs)
{
size_t groups = coeffs.size();
size_t order = coeffs[0][0].size();
@ -451,8 +452,8 @@ ScattDataHistogram::init(const xt::xtensor<int, 1>& in_gmin,
scattxs = xt::zeros<double>({groups});
for (int gin = 0; gin < groups; gin++) {
for (int i_gout = 0; i_gout < matrix[gin].size(); i_gout++) {
scattxs[gin] += std::accumulate(matrix[gin][i_gout].begin(),
matrix[gin][i_gout].end(), 0.);
scattxs[gin] += std::accumulate(
matrix[gin][i_gout].begin(), matrix[gin][i_gout].end(), 0.);
}
}
@ -463,11 +464,12 @@ ScattDataHistogram::init(const xt::xtensor<int, 1>& in_gmin,
int num_groups = in_gmax[gin] - in_gmin[gin] + 1;
in_energy[gin].resize(num_groups);
for (int i_gout = 0; i_gout < num_groups; i_gout++) {
double norm = std::accumulate(matrix[gin][i_gout].begin(),
matrix[gin][i_gout].end(), 0.);
double norm = std::accumulate(
matrix[gin][i_gout].begin(), matrix[gin][i_gout].end(), 0.);
in_energy[gin][i_gout] = norm;
if (norm != 0.) {
for (auto& n : matrix[gin][i_gout]) n /= norm;
for (auto& n : matrix[gin][i_gout])
n /= norm;
}
}
}
@ -492,8 +494,8 @@ ScattDataHistogram::init(const xt::xtensor<int, 1>& in_gmin,
// Integrate the histogram
dist[gin][i_gout][0] = dmu * matrix[gin][i_gout][0];
for (int imu = 1; imu < order; imu++) {
dist[gin][i_gout][imu] = dmu * matrix[gin][i_gout][imu] +
dist[gin][i_gout][imu - 1];
dist[gin][i_gout][imu] =
dmu * matrix[gin][i_gout][imu] + dist[gin][i_gout][imu - 1];
}
// Now re-normalize for integral to unity
@ -510,8 +512,7 @@ ScattDataHistogram::init(const xt::xtensor<int, 1>& in_gmin,
//==============================================================================
double
ScattDataHistogram::calc_f(int gin, int gout, double mu)
double ScattDataHistogram::calc_f(int gin, int gout, double mu)
{
double f;
if ((gout < gmin[gin]) || (gout > gmax[gin])) {
@ -534,9 +535,8 @@ ScattDataHistogram::calc_f(int gin, int gout, double mu)
//==============================================================================
void
ScattDataHistogram::sample(int gin, int& gout, double& mu, double& wgt,
uint64_t* seed)
void ScattDataHistogram::sample(
int gin, int& gout, double& mu, double& wgt, uint64_t* seed)
{
// Sample the outgoing energy using the base-class method
int i_gout;
@ -549,9 +549,9 @@ ScattDataHistogram::sample(int gin, int& gout, double& mu, double& wgt,
if (xi < dist[gin][i_gout][0]) {
imu = 0;
} else {
imu = std::upper_bound(dist[gin][i_gout].begin(),
dist[gin][i_gout].end(), xi) -
dist[gin][i_gout].begin();
imu =
std::upper_bound(dist[gin][i_gout].begin(), dist[gin][i_gout].end(), xi) -
dist[gin][i_gout].begin();
}
// Randomly select mu within the imu bin
@ -569,8 +569,7 @@ ScattDataHistogram::sample(int gin, int& gout, double& mu, double& wgt,
//==============================================================================
xt::xtensor<double, 3>
ScattDataHistogram::get_matrix(size_t max_order)
xt::xtensor<double, 3> ScattDataHistogram::get_matrix(size_t max_order)
{
// Get the sizes and initialize the data to 0
size_t groups = energy.size();
@ -582,8 +581,8 @@ ScattDataHistogram::get_matrix(size_t max_order)
for (int i_gout = 0; i_gout < energy[gin].size(); i_gout++) {
int gout = i_gout + gmin[gin];
for (int l = 0; l < order_dim; l++) {
matrix(gin, gout, l) = scattxs[gin] * energy[gin][i_gout] *
fmu[gin][i_gout][l];
matrix(gin, gout, l) =
scattxs[gin] * energy[gin][i_gout] * fmu[gin][i_gout][l];
}
}
}
@ -599,7 +598,8 @@ void ScattDataHistogram::combine(
size_t max_order = those_scatts[0]->get_order();
for (int i = 0; i < those_scatts.size(); i++) {
// Lets also make sure these items are combineable
ScattDataHistogram* that = dynamic_cast<ScattDataHistogram*>(those_scatts[i]);
ScattDataHistogram* that =
dynamic_cast<ScattDataHistogram*>(those_scatts[i]);
if (!that) {
fatal_error("Cannot combine the ScattData objects!");
}
@ -608,7 +608,7 @@ void ScattDataHistogram::combine(
}
}
size_t groups = those_scatts[0] -> energy.size();
size_t groups = those_scatts[0]->energy.size();
xt::xtensor<int, 1> in_gmin({groups}, 0);
xt::xtensor<int, 1> in_gmax({groups}, 0);
@ -620,7 +620,7 @@ void ScattDataHistogram::combine(
// matrices
size_t order_dim = max_order;
ScattData::base_combine(max_order, order_dim, those_scatts, scalars, in_gmin,
in_gmax, sparse_mult, sparse_scatter);
in_gmax, sparse_mult, sparse_scatter);
// Got everything we need, store it.
init(in_gmin, in_gmax, sparse_mult, sparse_scatter);
@ -630,10 +630,9 @@ void ScattDataHistogram::combine(
// ScattDataTabular methods
//==============================================================================
void
ScattDataTabular::init(const xt::xtensor<int, 1>& in_gmin,
const xt::xtensor<int, 1>& in_gmax, const double_2dvec& in_mult,
const double_3dvec& coeffs)
void ScattDataTabular::init(const xt::xtensor<int, 1>& in_gmin,
const xt::xtensor<int, 1>& in_gmax, const double_2dvec& in_mult,
const double_3dvec& coeffs)
{
size_t groups = coeffs.size();
size_t order = coeffs[0][0].size();
@ -651,8 +650,8 @@ ScattDataTabular::init(const xt::xtensor<int, 1>& in_gmin,
for (int gin = 0; gin < groups; gin++) {
for (int i_gout = 0; i_gout < matrix[gin].size(); i_gout++) {
for (int imu = 1; imu < order; imu++) {
scattxs[gin] += 0.5 * dmu * (matrix[gin][i_gout][imu - 1] +
matrix[gin][i_gout][imu]);
scattxs[gin] +=
0.5 * dmu * (matrix[gin][i_gout][imu - 1] + matrix[gin][i_gout][imu]);
}
}
}
@ -665,8 +664,8 @@ ScattDataTabular::init(const xt::xtensor<int, 1>& in_gmin,
for (int i_gout = 0; i_gout < num_groups; i_gout++) {
double norm = 0.;
for (int imu = 1; imu < order; imu++) {
norm += 0.5 * dmu * (matrix[gin][i_gout][imu - 1] +
matrix[gin][i_gout][imu]);
norm +=
0.5 * dmu * (matrix[gin][i_gout][imu - 1] + matrix[gin][i_gout][imu]);
}
in_energy[gin][i_gout] = norm;
}
@ -687,15 +686,15 @@ ScattDataTabular::init(const xt::xtensor<int, 1>& in_gmin,
// Ensure positivity
for (auto& val : fmu[gin][i_gout]) {
if (val < 0.) val = 0.;
if (val < 0.)
val = 0.;
}
// Now re-normalize for numerical integration issues and to take care of
// the above negative fix-up. Also accrue the CDF
double norm = 0.;
for (int imu = 1; imu < order; imu++) {
norm += 0.5 * dmu * (fmu[gin][i_gout][imu - 1] +
fmu[gin][i_gout][imu]);
norm += 0.5 * dmu * (fmu[gin][i_gout][imu - 1] + fmu[gin][i_gout][imu]);
// incorporate to the CDF
dist[gin][i_gout][imu] = norm;
}
@ -713,8 +712,7 @@ ScattDataTabular::init(const xt::xtensor<int, 1>& in_gmin,
//==============================================================================
double
ScattDataTabular::calc_f(int gin, int gout, double mu)
double ScattDataTabular::calc_f(int gin, int gout, double mu)
{
double f;
if ((gout < gmin[gin]) || (gout > gmax[gin])) {
@ -738,9 +736,8 @@ ScattDataTabular::calc_f(int gin, int gout, double mu)
//==============================================================================
void
ScattDataTabular::sample(int gin, int& gout, double& mu, double& wgt,
uint64_t* seed)
void ScattDataTabular::sample(
int gin, int& gout, double& mu, double& wgt, uint64_t* seed)
{
// Sample the outgoing energy using the base-class method
int i_gout;
@ -754,7 +751,8 @@ ScattDataTabular::sample(int gin, int& gout, double& mu, double& wgt,
int k;
for (k = 0; k < NP - 1; k++) {
double c_k1 = dist[gin][i_gout][k + 1];
if (xi < c_k1) break;
if (xi < c_k1)
break;
c_k = c_k1;
}
@ -763,16 +761,17 @@ ScattDataTabular::sample(int gin, int& gout, double& mu, double& wgt,
// Find the pdf values we want
double p0 = fmu[gin][i_gout][k];
double mu0 = this -> mu[k];
double mu0 = this->mu[k];
double p1 = fmu[gin][i_gout][k + 1];
double mu1 = this -> mu[k + 1];
double mu1 = this->mu[k + 1];
if (p0 == p1) {
mu = mu0 + (xi - c_k) / p0;
} else {
double frac = (p1 - p0) / (mu1 - mu0);
mu = mu0 + (std::sqrt(std::max(0., p0 * p0 + 2. * frac * (xi - c_k)))
- p0) / frac;
mu =
mu0 +
(std::sqrt(std::max(0., p0 * p0 + 2. * frac * (xi - c_k))) - p0) / frac;
}
if (mu < -1.) {
@ -787,8 +786,7 @@ ScattDataTabular::sample(int gin, int& gout, double& mu, double& wgt,
//==============================================================================
xt::xtensor<double, 3>
ScattDataTabular::get_matrix(size_t max_order)
xt::xtensor<double, 3> ScattDataTabular::get_matrix(size_t max_order)
{
// Get the sizes and initialize the data to 0
size_t groups = energy.size();
@ -800,8 +798,8 @@ ScattDataTabular::get_matrix(size_t max_order)
for (int i_gout = 0; i_gout < energy[gin].size(); i_gout++) {
int gout = i_gout + gmin[gin];
for (int l = 0; l < order_dim; l++) {
matrix(gin, gout, l) = scattxs[gin] * energy[gin][i_gout] *
fmu[gin][i_gout][l];
matrix(gin, gout, l) =
scattxs[gin] * energy[gin][i_gout] * fmu[gin][i_gout][l];
}
}
}
@ -826,7 +824,7 @@ void ScattDataTabular::combine(
}
}
size_t groups = those_scatts[0] -> energy.size();
size_t groups = those_scatts[0]->energy.size();
xt::xtensor<int, 1> in_gmin({groups}, 0);
xt::xtensor<int, 1> in_gmax({groups}, 0);
@ -838,7 +836,7 @@ void ScattDataTabular::combine(
// matrices
size_t order_dim = max_order;
ScattData::base_combine(max_order, order_dim, those_scatts, scalars, in_gmin,
in_gmax, sparse_mult, sparse_scatter);
in_gmax, sparse_mult, sparse_scatter);
// Got everything we need, store it.
init(in_gmin, in_gmax, sparse_mult, sparse_scatter);
@ -848,8 +846,7 @@ void ScattDataTabular::combine(
// module-level methods
//==============================================================================
void
convert_legendre_to_tabular(ScattDataLegendre& leg, ScattDataTabular& tab)
void convert_legendre_to_tabular(ScattDataLegendre& leg, ScattDataTabular& tab)
{
// See if the user wants us to figure out how many points to use
int n_mu = settings::legendre_to_tabular_points;
@ -880,13 +877,14 @@ convert_legendre_to_tabular(ScattDataLegendre& leg, ScattDataTabular& tab)
tab.fmu[gin][i_gout].resize(n_mu);
for (int imu = 0; imu < n_mu; imu++) {
tab.fmu[gin][i_gout][imu] =
evaluate_legendre(leg.dist[gin][i_gout].size() - 1,
leg.dist[gin][i_gout].data(), tab.mu[imu]);
evaluate_legendre(leg.dist[gin][i_gout].size() - 1,
leg.dist[gin][i_gout].data(), tab.mu[imu]);
}
// Ensure positivity
for (auto& val : tab.fmu[gin][i_gout]) {
if (val < 0.) val = 0.;
if (val < 0.)
val = 0.;
}
// Now re-normalize for numerical integration issues and to take care of
@ -894,8 +892,8 @@ convert_legendre_to_tabular(ScattDataLegendre& leg, ScattDataTabular& tab)
double norm = 0.;
tab.dist[gin][i_gout][0] = 0.;
for (int imu = 1; imu < n_mu; imu++) {
norm += 0.5 * tab.dmu * (tab.fmu[gin][i_gout][imu - 1] +
tab.fmu[gin][i_gout][imu]);
norm += 0.5 * tab.dmu *
(tab.fmu[gin][i_gout][imu - 1] + tab.fmu[gin][i_gout][imu]);
// incorporate to the CDF
tab.dist[gin][i_gout][imu] = norm;
}