From 5e3214d22dd4903f8c93cbce88b405e6b1378d08 Mon Sep 17 00:00:00 2001
From: Paul Romano <paul.k.romano@gmail.com>
Date: Wed, 30 Jan 2013 16:52:28 -0500
Subject: [PATCH] Updated documentation.

---
 ...981fa3920210c6ad8dbe5e968783d5dd7520c3.png | Bin 0 -> 171 bytes
 _sources/developers.txt                       |   2 +
 _sources/quickinstall.txt                     |  84 +++++-------
 _sources/releasenotes/index.txt               |   1 +
 _sources/releasenotes/notes_0.5.1.txt         |  38 ++++++
 _sources/usersguide/input.txt                 |   8 ++
 _sources/usersguide/install.txt               | 102 ++++++++++-----
 developers.html                               |   3 +-
 devguide/index.html                           |   2 +-
 devguide/statepoint.html                      |   2 +-
 devguide/structures.html                      |   2 +-
 devguide/styleguide.html                      |   2 +-
 devguide/workflow.html                        |   2 +-
 devguide/xml-fortran.html                     |   2 +-
 genindex.html                                 |   2 +-
 index.html                                    |   2 +-
 license.html                                  |   2 +-
 methods/cross_sections.html                   |   2 +-
 methods/eigenvalue.html                       |   2 +-
 methods/geometry.html                         |   2 +-
 methods/index.html                            |   2 +-
 methods/introduction.html                     |   2 +-
 methods/parallelization.html                  |   2 +-
 methods/physics.html                          |   2 +-
 methods/random_numbers.html                   |   2 +-
 methods/tallies.html                          |   2 +-
 objects.inv                                   | Bin 1633 -> 1650 bytes
 publications.html                             |   2 +-
 quickinstall.html                             |  60 ++++-----
 releasenotes/index.html                       |   9 +-
 releasenotes/notes_0.4.0.html                 |   2 +-
 releasenotes/notes_0.4.1.html                 |   2 +-
 releasenotes/notes_0.4.2.html                 |   2 +-
 releasenotes/notes_0.4.3.html                 |   2 +-
 releasenotes/notes_0.4.4.html                 |   2 +-
 releasenotes/notes_0.5.0.html                 |   8 +-
 releasenotes/notes_0.5.1.html                 | 122 ++++++++++++++++++
 search.html                                   |   2 +-
 searchindex.js                                |   2 +-
 usersguide/beginners.html                     |   2 +-
 usersguide/index.html                         |  28 ++--
 usersguide/input.html                         |  11 +-
 usersguide/install.html                       | 113 +++++++++++-----
 usersguide/troubleshoot.html                  |   2 +-
 44 files changed, 438 insertions(+), 207 deletions(-)
 create mode 100644 _images/math/66981fa3920210c6ad8dbe5e968783d5dd7520c3.png
 create mode 100644 _sources/releasenotes/notes_0.5.1.txt
 create mode 100644 releasenotes/notes_0.5.1.html

diff --git a/_images/math/66981fa3920210c6ad8dbe5e968783d5dd7520c3.png b/_images/math/66981fa3920210c6ad8dbe5e968783d5dd7520c3.png
new file mode 100644
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diff --git a/_sources/developers.txt b/_sources/developers.txt
index 4f4713aaef..685507e796 100644
--- a/_sources/developers.txt
+++ b/_sources/developers.txt
@@ -9,6 +9,7 @@ Active development of the OpenMC Monte Carlo code is currently led by:
 * `Paul Romano`_
 * `Bryan Herman`_
 * `Nick Horelik`_
+* `Adam Nelson`_
 
 Advisors to the project include:
 
@@ -19,6 +20,7 @@ Advisors to the project include:
 .. _Paul Romano: mailto:paul.k.romano@gmail.com
 .. _Bryan Herman: mailto:bherman@mit.edu
 .. _Nick Horelik: mailto:nhorelik@mit.edu
+.. _Adam Nelson: mailto:nelsonag@umich.edu
 .. _Benoit Forget: mailto:bforget@mit.edu
 .. _Kord Smith: mailto:kord@mit.edu
 .. _Andrew Siegel: mailto:siegela@mcs.anl.gov
diff --git a/_sources/quickinstall.txt b/_sources/quickinstall.txt
index 58bdfaf404..653ac3d863 100644
--- a/_sources/quickinstall.txt
+++ b/_sources/quickinstall.txt
@@ -8,67 +8,47 @@ This quick install guide outlines the basic steps needed to install OpenMC on
 your computer. For more detailed instructions on configuring and installing
 OpenMC, see :ref:`usersguide_install` in the User's Manual.
 
--------------
-Prerequisites
--------------
+--------------------------------
+Installing on Ubuntu through PPA
+--------------------------------
 
-In order to compile and run OpenMC, a number of prerequisite software packages
-and libraries may be needed. These include:
+For users with Ubuntu 11.10 or later, a binary package for OpenMC is available
+through a `Personal Package Archive`_ (PPA) and can be installed through the `APT
+package manager`_. Simply enter the following commands into the terminal:
 
-- A Fortran compiler such as gfortran_
-- git_ version control software for obtaining source code (*optional*)
-- An MPI implementation for parallel runs (*optional*)
-- HDF5_ Library for portable binary output format (*optional*)
-- PETSc_ for CMFD acceleration (*optional*)
+.. code-block:: sh
 
-.. _gfortran: http://gcc.gnu.org/wiki/GFortran
-.. _git: http://git-scm.com
+    sudo apt-add-repository ppa:paulromano/staging
+    sudo apt-get update
+    sudo apt-get install openmc
+
+Currently, the binary package does not allow for parallel simulations, HDF5_, or
+CMFD acceleration through PETSc_. Users who need such capabilities should build
+OpenMC from source as is described in :ref:`usersguide_install`.
+
+.. _Personal Package Archive: https://launchpad.net/~paulromano/+archive/staging
+.. _APT package manager: https://help.ubuntu.com/community/AptGet/Howto
 .. _HDF5: http://www.hdfgroup.org/HDF5/
 .. _PETSc: http://www.mcs.anl.gov/petsc/
 
---------------------
-Obtaining the Source
---------------------
+-------------------------------------------
+Installing from Source on Linux or Mac OS X
+-------------------------------------------
 
-All OpenMC source code is hosted on GitHub_. The latest version of the OpenMC
-source code can be downloaded from GitHub with the following command::
+All OpenMC source code is hosted on GitHub_. If you have git_ and the gfortran_
+compiler installed, you can download and install OpenMC be entering the
+following commands in a terminal:
+
+.. code-block:: sh
 
     git clone git@github.com:mit-crpg/openmc.git
+    cd openmc/src
+    make
+    sudo make install
 
-If you don't have git installed, you can download the source as a zip or tar
-file directly from GitHub.
+This will build an executable named ``openmc`` and install it (by default in
+/usr/local/bin).
 
 .. _GitHub: https://github.com/mit-crpg/openmc
-
--------------------------------
-Compiling on Linux and Mac OS X
--------------------------------
-
-To compile OpenMC on Linux or Max OS X, run the following commands from within
-the root directory of the source code:
-
-.. code-block:: sh
-
-    cd src
-    make
-
-This will build an executable named ``openmc``.
-
---------------------
-Compiling on Windows
---------------------
-
-To compile OpenMC on a Windows operating system, you will need to first install
-Cygwin_, a Linux-like environment for Windows. When configuring Cygwin, make
-sure you install both the gfortran compiler as well as git. Once you have
-obtained the source code, run the following commands from within the source code
-root directory:
-
-.. code-block:: sh
-
-    cd src
-    make
-
-This will build an executable named ``openmc``.
-
-.. _Cygwin: http://www.cygwin.com/
+.. _git: http://git-scm.com
+.. _gfortran: http://gcc.gnu.org/wiki/GFortran
diff --git a/_sources/releasenotes/index.txt b/_sources/releasenotes/index.txt
index e00b199f82..1fb7c0e15c 100644
--- a/_sources/releasenotes/index.txt
+++ b/_sources/releasenotes/index.txt
@@ -10,6 +10,7 @@ bugs fixed, and known issues for each successive release.
 .. toctree::
     :maxdepth: 1
 
+    notes_0.5.1
     notes_0.5.0
     notes_0.4.4
     notes_0.4.3
diff --git a/_sources/releasenotes/notes_0.5.1.txt b/_sources/releasenotes/notes_0.5.1.txt
new file mode 100644
index 0000000000..ea61e65da1
--- /dev/null
+++ b/_sources/releasenotes/notes_0.5.1.txt
@@ -0,0 +1,38 @@
+.. _notes_0.5.1:
+
+==============================
+Release Notes for OpenMC 0.5.1
+==============================
+
+.. note::
+   These release notes are for an upcoming release of OpenMC and are still
+   subject to change.
+
+-------------------
+System Requirements
+-------------------
+
+There are no special requirements for running the OpenMC code. As of this
+release, OpenMC has been tested on a variety of Linux distributions, Mac OS X,
+and Microsoft Windows 7. Memory requirements will vary depending on the size of
+the problem at hand (mostly on the number of nuclides in the problem).
+
+------------
+New Features
+------------
+
+- Proper install capability with 'make install'.
+- Lattices can now be 2 or 3 dimensions.
+- New scatter-PN score type.
+- New kappa-fission score type.
+- Ability to tally any reaction by specifying MT.
+
+---------
+Bug Fixes
+---------
+
+- 63bfd2_: Fix tracklength tallies with cell filter and universes.
+- 88daf7_: Fix analog tallies with survival biasing.
+
+.. _63bfd2: https://github.com/mit-crpg/openmc/commit/63bfd2
+.. _88daf7: https://github.com/mit-crpg/openmc/commit/88daf7
diff --git a/_sources/usersguide/input.txt b/_sources/usersguide/input.txt
index 1e25ab4d5e..e2df231fb4 100644
--- a/_sources/usersguide/input.txt
+++ b/_sources/usersguide/input.txt
@@ -836,6 +836,14 @@ The following responses can be tallied.
 
   :nu-fission:
     Total production of neutrons due to fission
+    
+  :kappa-fission:
+    The recoverable energy production rate due to fission. The recoverable
+    energy is defined as the fission product kinetic energy, prompt and delayed neutron
+    kinetic energies, prompt and delayed :math:`\gamma`-ray total energies,
+    and the total energy released by the delayed :math:`\beta` particles. The 
+    neutrino energy does not contribute to this response. The prompt and delayed 
+    :math:`\gamma`-rays are assumed to deposit their energy locally.
 
   :events:
     Number of scoring events
diff --git a/_sources/usersguide/install.txt b/_sources/usersguide/install.txt
index 971c3bb015..b701fc3da2 100644
--- a/_sources/usersguide/install.txt
+++ b/_sources/usersguide/install.txt
@@ -4,38 +4,82 @@
 Installation and Configuration
 ==============================
 
--------------
+-----------------------------
+Installing on Ubuntu with PPA
+-----------------------------
+
+For users with Ubuntu 11.10 or later, a binary package for OpenMC is available
+through a Personal Package Archive (PPA) and can be installed through the APT
+package manager. First, add the following PPA to the repository sources:
+
+.. code-block:: sh
+
+    sudo apt-add-repository ppa:paulromano/staging
+
+Next, resynchronize the package index files:
+
+.. code-block:: sh
+
+    sudo apt-get update
+
+Now OpenMC should be recognized within the repository and can be installed:
+
+.. code-block:: sh
+
+    sudo apt-get install openmc
+
+--------------------
+Building from Source
+--------------------
+
 Prerequisites
 -------------
 
-In order to compile OpenMC, you will need to have a Fortran compiler installed
-on your machine. Since a number of Fortran 2003/2008 features are used in the
-code, it is recommended that you use the latest version of whatever compiler you
-choose. For gfortran_, it is recommended that you use version 4.5.0 or above.
+.. admonition:: Required
 
-If you are using Debian or a Debian derivative such as Ubuntu, you can install
-the gfortran compiler using the following command::
+    * A Fortran compiler such as gfortran_
 
-    sudo apt-get install gfortran
+      In order to compile OpenMC, you will need to have a Fortran compiler
+      installed on your machine. Since a number of Fortran 2003/2008 features
+      are used in the code, it is recommended that you use the latest version of
+      whatever compiler you choose. For gfortran_, it is necessary to use
+      version 4.6.0 or above.
 
-To compile with support for parallel runs on a distributed-memory architecture,
-you will need to have a valid implementation of MPI installed on your
-machine. The code has been tested and is known to work with the latest versions
-of both OpenMPI_ and MPICH2_. Note that if using OpenMPI, make sure that
---with-mpi-f90-size is not set to medium or large since this may prevent MPI
-calls from completing successfully in OpenMC. OpenMPI and/or MPICH2 can be
-installed on Debian derivatives with::
+      If you are using Debian or a Debian derivative such as Ubuntu, you can
+      install the gfortran compiler using the following command::
 
-    sudo apt-get install mpich2
-    sudo apt-get install openmpi-bin
+          sudo apt-get install gfortran
 
-To compile with support for HDF5_ output (highly recommended), you will need to
-have HDF5 installed on your computer. The installed version will need to have
-been compiled with the same compiler you intend to compile OpenMC with.
+.. admonition:: Optional
 
-To enable CMFD acceleration, you will need to have PETSc_ installed on your
-computer. The installed version will need to have been compiled with the same
-compiler you intend to compile OpenMC with.
+    * An MPI implementation for distributed-memory parallel runs
+
+      To compile with support for parallel runs on a distributed-memory
+      architecture, you will need to have a valid implementation of MPI
+      installed on your machine. The code has been tested and is known to work
+      with the latest versions of both OpenMPI_ and MPICH2_. Note that if using
+      OpenMPI, make sure that --with-mpi-f90-size is not set to medium or large
+      since this may prevent MPI calls from completing successfully in
+      OpenMC. OpenMPI and/or MPICH2 can be installed on Debian derivatives
+      with::
+
+          sudo apt-get install mpich2
+          sudo apt-get install openmpi-bin
+
+    * HDF5_ Library for portable binary output format
+
+      To compile with support for HDF5_ output (highly recommended), you will
+      need to have HDF5 installed on your computer. The installed version will
+      need to have been compiled with the same compiler you intend to compile
+      OpenMC with.
+
+    * PETSc_ for CMFD acceleration
+
+      To enable CMFD acceleration, you will need to have PETSc_ installed on
+      your computer. The installed version will need to have been compiled with
+      the same compiler you intend to compile OpenMC with.
+
+    * git_ version control software for obtaining source code
 
 .. _gfortran: http://gcc.gnu.org/wiki/GFortran
 .. _OpenMPI: http://www.open-mpi.org
@@ -43,7 +87,6 @@ compiler you intend to compile OpenMC with.
 .. _HDF5: http://www.hdfgroup.org/HDF5/
 .. _PETSc: http://www.mcs.anl.gov/petsc/
 
---------------------
 Obtaining the Source
 --------------------
 
@@ -63,7 +106,6 @@ repository::
 .. _git: http://git-scm.com
 .. _ssh: http://en.wikipedia.org/wiki/Secure_Shell
 
--------------------
 Build Configuration
 -------------------
 
@@ -108,7 +150,6 @@ Makefile, you can enter the following from a terminal::
 
     make DEBUG=yes
 
--------------------------------
 Compiling on Linux and Mac OS X
 -------------------------------
 
@@ -119,15 +160,16 @@ the root directory of the source code:
 
     cd src
     make
+    sudo make install
 
-This will build an executable named ``openmc``.
+This will build an executable named ``openmc`` and install it (by default in
+/usr/local/bin).
 
---------------------
 Compiling on Windows
 --------------------
 
 Using Cygwin
-------------
+++++++++++++
 
 One option for compiling OpenMC on a Windows operating system is to use Cygwin_,
 a Linux-like environment for Windows. You will need to first `install
@@ -165,7 +207,7 @@ This will build an executable named ``openmc``.
 .. _install Cygwin: http://cygwin.com/setup.exe
 
 Using MinGW
------------
++++++++++++
 
 An alternate option for installing OpenMC on Windows is using MinGW_, which
 stands for Minimalist GNU for Windows. An executable for installing the MinGW
diff --git a/developers.html b/developers.html
index b748a4c00c..644855a062 100644
--- a/developers.html
+++ b/developers.html
@@ -55,6 +55,7 @@
 <li><a class="reference external" href="mailto:paul&#46;k&#46;romano&#37;&#52;&#48;gmail&#46;com">Paul Romano</a></li>
 <li><a class="reference external" href="mailto:bherman&#37;&#52;&#48;mit&#46;edu">Bryan Herman</a></li>
 <li><a class="reference external" href="mailto:nhorelik&#37;&#52;&#48;mit&#46;edu">Nick Horelik</a></li>
+<li><a class="reference external" href="mailto:nelsonag&#37;&#52;&#48;umich&#46;edu">Adam Nelson</a></li>
 </ul>
 <p>Advisors to the project include:</p>
 <ul class="simple">
@@ -78,7 +79,7 @@
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/devguide/index.html b/devguide/index.html
index f6a731585b..bd76895566 100644
--- a/devguide/index.html
+++ b/devguide/index.html
@@ -111,7 +111,7 @@ as debugging.</p>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/devguide/statepoint.html b/devguide/statepoint.html
index ad7f2661c4..4566219138 100644
--- a/devguide/statepoint.html
+++ b/devguide/statepoint.html
@@ -1165,7 +1165,7 @@ the i-th tally</div></blockquote>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/devguide/structures.html b/devguide/structures.html
index 3a562a9dd7..a96560bd09 100644
--- a/devguide/structures.html
+++ b/devguide/structures.html
@@ -188,7 +188,7 @@ module</a> is of type MaterialMacroXS.</p>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/devguide/styleguide.html b/devguide/styleguide.html
index eaafee08c6..f92eb3d7aa 100644
--- a/devguide/styleguide.html
+++ b/devguide/styleguide.html
@@ -174,7 +174,7 @@ No:  if ( variable==2 ) then</pre>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/devguide/workflow.html b/devguide/workflow.html
index 06e3eb45df..86813dcdaf 100644
--- a/devguide/workflow.html
+++ b/devguide/workflow.html
@@ -101,7 +101,7 @@ of pulling a branch from your private repository into your public fork.</p>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/devguide/xml-fortran.html b/devguide/xml-fortran.html
index e63fe24f66..bb57fbc520 100644
--- a/devguide/xml-fortran.html
+++ b/devguide/xml-fortran.html
@@ -96,7 +96,7 @@ run. You will need to be familiar with RELAX NG <a class="reference external" hr
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/genindex.html b/genindex.html
index d94d945e22..88156c335f 100644
--- a/genindex.html
+++ b/genindex.html
@@ -110,7 +110,7 @@
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/index.html b/index.html
index 5eabde551b..e7b5a4cd03 100644
--- a/index.html
+++ b/index.html
@@ -89,7 +89,7 @@ feel free to contact <a class="reference external" href="mailto:paul&#46;k&#46;r
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/license.html b/license.html
index 841cf36b7d..907962e567 100644
--- a/license.html
+++ b/license.html
@@ -86,7 +86,7 @@ CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.</p>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/methods/cross_sections.html b/methods/cross_sections.html
index 562298f633..0d7aedc15d 100644
--- a/methods/cross_sections.html
+++ b/methods/cross_sections.html
@@ -144,7 +144,7 @@ indexing</em> and is available as an option in Serpent (see paper by <a class="r
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/methods/eigenvalue.html b/methods/eigenvalue.html
index 13760cbac0..4df30fb6e7 100644
--- a/methods/eigenvalue.html
+++ b/methods/eigenvalue.html
@@ -179,7 +179,7 @@ Convergence,&#8221; <em>Trans. Am. Nucl. Soc.</em>, <strong>98</strong>, 512 (20
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/methods/geometry.html b/methods/geometry.html
index 1bb67d365a..07b5c2a94b 100644
--- a/methods/geometry.html
+++ b/methods/geometry.html
@@ -601,7 +601,7 @@ w' = w - \frac{2 ( \bar{x}u + \bar{y}v + \bar{z}w ) \bar{z} }{R^2}"/></p>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/methods/index.html b/methods/index.html
index 23c4e314e5..8d93c3f11c 100644
--- a/methods/index.html
+++ b/methods/index.html
@@ -187,7 +187,7 @@
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/methods/introduction.html b/methods/introduction.html
index ceadb40bf6..05208c4428 100644
--- a/methods/introduction.html
+++ b/methods/introduction.html
@@ -180,7 +180,7 @@ and its variance is calculated.</li>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/methods/parallelization.html b/methods/parallelization.html
index 1da0e1c2b1..75dbc69138 100644
--- a/methods/parallelization.html
+++ b/methods/parallelization.html
@@ -526,7 +526,7 @@ Radiation Penetration Calculations on a Parallel Computer,&#8221;
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/methods/physics.html b/methods/physics.html
index 1562164600..f144d04ddb 100644
--- a/methods/physics.html
+++ b/methods/physics.html
@@ -1179,7 +1179,7 @@ book can be obtained for free from the <a class="reference external" href="http:
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/methods/random_numbers.html b/methods/random_numbers.html
index 4cce6508c3..883a63281a 100644
--- a/methods/random_numbers.html
+++ b/methods/random_numbers.html
@@ -129,7 +129,7 @@ Different Sizes and Good Lattice Structures,&#8221; <em>Math. Comput.</em>, <str
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/methods/tallies.html b/methods/tallies.html
index 2335646511..7949b402dc 100644
--- a/methods/tallies.html
+++ b/methods/tallies.html
@@ -426,7 +426,7 @@ in Statistics - Simulation and Computation, 16 (4), pp. 1123-1132 (1987).</td></
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
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diff --git a/publications.html b/publications.html
index 9e0031643a..42aa6766f1 100644
--- a/publications.html
+++ b/publications.html
@@ -86,7 +86,7 @@ Carlo Criticality Calculations,&#8221; <em>Nucl. Sci. Eng.</em>, <strong>170</st
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/quickinstall.html b/quickinstall.html
index 8c260ff5a7..306bbd87bd 100644
--- a/quickinstall.html
+++ b/quickinstall.html
@@ -56,49 +56,33 @@
 <p>This quick install guide outlines the basic steps needed to install OpenMC on
 your computer. For more detailed instructions on configuring and installing
 OpenMC, see <a class="reference internal" href="usersguide/install.html#usersguide-install"><em>Installation and Configuration</em></a> in the User&#8217;s Manual.</p>
-<div class="section" id="prerequisites">
-<h2>Prerequisites<a class="headerlink" href="#prerequisites" title="Permalink to this headline">¶</a></h2>
-<p>In order to compile and run OpenMC, a number of prerequisite software packages
-and libraries may be needed. These include:</p>
-<ul class="simple">
-<li>A Fortran compiler such as <a class="reference external" href="http://gcc.gnu.org/wiki/GFortran">gfortran</a></li>
-<li><a class="reference external" href="http://git-scm.com">git</a> version control software for obtaining source code (<em>optional</em>)</li>
-<li>An MPI implementation for parallel runs (<em>optional</em>)</li>
-<li><a class="reference external" href="http://www.hdfgroup.org/HDF5/">HDF5</a> Library for portable binary output format (<em>optional</em>)</li>
-<li><a class="reference external" href="http://www.mcs.anl.gov/petsc/">PETSc</a> for CMFD acceleration (<em>optional</em>)</li>
-</ul>
-</div>
-<div class="section" id="obtaining-the-source">
-<h2>Obtaining the Source<a class="headerlink" href="#obtaining-the-source" title="Permalink to this headline">¶</a></h2>
-<p>All OpenMC source code is hosted on <a class="reference external" href="https://github.com/mit-crpg/openmc">GitHub</a>. The latest version of the OpenMC
-source code can be downloaded from GitHub with the following command:</p>
-<div class="highlight-python"><pre>git clone git@github.com:mit-crpg/openmc.git</pre>
-</div>
-<p>If you don&#8217;t have git installed, you can download the source as a zip or tar
-file directly from GitHub.</p>
-</div>
-<div class="section" id="compiling-on-linux-and-mac-os-x">
-<h2>Compiling on Linux and Mac OS X<a class="headerlink" href="#compiling-on-linux-and-mac-os-x" title="Permalink to this headline">¶</a></h2>
-<p>To compile OpenMC on Linux or Max OS X, run the following commands from within
-the root directory of the source code:</p>
-<div class="highlight-sh"><div class="highlight"><pre><span class="nb">cd </span>src
-make
+<div class="section" id="installing-on-ubuntu-through-ppa">
+<h2>Installing on Ubuntu through PPA<a class="headerlink" href="#installing-on-ubuntu-through-ppa" title="Permalink to this headline">¶</a></h2>
+<p>For users with Ubuntu 11.10 or later, a binary package for OpenMC is available
+through a <a class="reference external" href="https://launchpad.net/~paulromano/+archive/staging">Personal Package Archive</a> (PPA) and can be installed through the <a class="reference external" href="https://help.ubuntu.com/community/AptGet/Howto">APT
+package manager</a>. Simply enter the following commands into the terminal:</p>
+<div class="highlight-sh"><div class="highlight"><pre>sudo apt-add-repository ppa:paulromano/staging
+sudo apt-get update
+sudo apt-get install openmc
 </pre></div>
 </div>
-<p>This will build an executable named <tt class="docutils literal"><span class="pre">openmc</span></tt>.</p>
+<p>Currently, the binary package does not allow for parallel simulations, <a class="reference external" href="http://www.hdfgroup.org/HDF5/">HDF5</a>, or
+CMFD acceleration through <a class="reference external" href="http://www.mcs.anl.gov/petsc/">PETSc</a>. Users who need such capabilities should build
+OpenMC from source as is described in <a class="reference internal" href="usersguide/install.html#usersguide-install"><em>Installation and Configuration</em></a>.</p>
 </div>
-<div class="section" id="compiling-on-windows">
-<h2>Compiling on Windows<a class="headerlink" href="#compiling-on-windows" title="Permalink to this headline">¶</a></h2>
-<p>To compile OpenMC on a Windows operating system, you will need to first install
-<a class="reference external" href="http://www.cygwin.com/">Cygwin</a>, a Linux-like environment for Windows. When configuring Cygwin, make
-sure you install both the gfortran compiler as well as git. Once you have
-obtained the source code, run the following commands from within the source code
-root directory:</p>
-<div class="highlight-sh"><div class="highlight"><pre><span class="nb">cd </span>src
+<div class="section" id="installing-from-source-on-linux-or-mac-os-x">
+<h2>Installing from Source on Linux or Mac OS X<a class="headerlink" href="#installing-from-source-on-linux-or-mac-os-x" title="Permalink to this headline">¶</a></h2>
+<p>All OpenMC source code is hosted on <a class="reference external" href="https://github.com/mit-crpg/openmc">GitHub</a>. If you have <a class="reference external" href="http://git-scm.com">git</a> and the <a class="reference external" href="http://gcc.gnu.org/wiki/GFortran">gfortran</a>
+compiler installed, you can download and install OpenMC be entering the
+following commands in a terminal:</p>
+<div class="highlight-sh"><div class="highlight"><pre>git clone git@github.com:mit-crpg/openmc.git
+<span class="nb">cd </span>openmc/src
 make
+sudo make install
 </pre></div>
 </div>
-<p>This will build an executable named <tt class="docutils literal"><span class="pre">openmc</span></tt>.</p>
+<p>This will build an executable named <tt class="docutils literal"><span class="pre">openmc</span></tt> and install it (by default in
+/usr/local/bin).</p>
 </div>
 </div>
 
@@ -118,7 +102,7 @@ make
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/releasenotes/index.html b/releasenotes/index.html
index e8c173948e..42e244a40b 100644
--- a/releasenotes/index.html
+++ b/releasenotes/index.html
@@ -28,7 +28,7 @@
     <script type="text/javascript" src="../_static/doctools.js"></script>
     <script type="text/javascript" src="../_static/theme_extras.js"></script>
     <link rel="top" title="OpenMC Documentation" href="../index.html" />
-    <link rel="next" title="Release Notes for OpenMC 0.5.0" href="notes_0.5.0.html" />
+    <link rel="next" title="Release Notes for OpenMC 0.5.1" href="notes_0.5.1.html" />
     <link rel="prev" title="Quick Install Guide" href="../quickinstall.html" /> 
   </head>
   <body>
@@ -44,7 +44,7 @@
         &#160;&#160;::&#160;&#160;
         <a class="uplink" href="../index.html">Contents</a>
         &#160;&#160;::&#160;&#160;
-        <a href="notes_0.5.0.html">Release Notes for OpenMC 0.5.0</a>&#160;&#160;»
+        <a href="notes_0.5.1.html">Release Notes for OpenMC 0.5.1</a>&#160;&#160;»
         </p>
 
       </div>
@@ -57,6 +57,7 @@
 bugs fixed, and known issues for each successive release.</p>
 <div class="toctree-wrapper compound">
 <ul>
+<li class="toctree-l1"><a class="reference internal" href="notes_0.5.1.html">Release Notes for OpenMC 0.5.1</a></li>
 <li class="toctree-l1"><a class="reference internal" href="notes_0.5.0.html">Release Notes for OpenMC 0.5.0</a></li>
 <li class="toctree-l1"><a class="reference internal" href="notes_0.4.4.html">Release Notes for OpenMC 0.4.4</a></li>
 <li class="toctree-l1"><a class="reference internal" href="notes_0.4.3.html">Release Notes for OpenMC 0.4.3</a></li>
@@ -76,14 +77,14 @@ bugs fixed, and known issues for each successive release.</p>
         &#160;&#160;::&#160;&#160;
         <a class="uplink" href="../index.html">Contents</a>
         &#160;&#160;::&#160;&#160;
-        <a href="notes_0.5.0.html">Release Notes for OpenMC 0.5.0</a>&#160;&#160;»
+        <a href="notes_0.5.1.html">Release Notes for OpenMC 0.5.1</a>&#160;&#160;»
         </p>
 
       </div>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/releasenotes/notes_0.4.0.html b/releasenotes/notes_0.4.0.html
index c0335958bd..3a15af365f 100644
--- a/releasenotes/notes_0.4.0.html
+++ b/releasenotes/notes_0.4.0.html
@@ -101,7 +101,7 @@ can now be successfully run in OpenMC.</li>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/releasenotes/notes_0.4.1.html b/releasenotes/notes_0.4.1.html
index a8d962e077..61f7924402 100644
--- a/releasenotes/notes_0.4.1.html
+++ b/releasenotes/notes_0.4.1.html
@@ -113,7 +113,7 @@ the source bank to be of type Bank rather than of type Particle.</li>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/releasenotes/notes_0.4.2.html b/releasenotes/notes_0.4.2.html
index 9b958ff205..c480857b6d 100644
--- a/releasenotes/notes_0.4.2.html
+++ b/releasenotes/notes_0.4.2.html
@@ -110,7 +110,7 @@ nuclide on the material.</li>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/releasenotes/notes_0.4.3.html b/releasenotes/notes_0.4.3.html
index d9bf999df9..f218a0b488 100644
--- a/releasenotes/notes_0.4.3.html
+++ b/releasenotes/notes_0.4.3.html
@@ -107,7 +107,7 @@ the problem at hand (mostly on the number of nuclides in the problem).</p>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/releasenotes/notes_0.4.4.html b/releasenotes/notes_0.4.4.html
index f397215bfe..d39c9b255d 100644
--- a/releasenotes/notes_0.4.4.html
+++ b/releasenotes/notes_0.4.4.html
@@ -104,7 +104,7 @@ to turn them on with &lt;output&gt; tag in settings.xml file.</li>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
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-    <link rel="prev" title="Release Notes" href="index.html" /> 
+    <link rel="prev" title="Release Notes for OpenMC 0.5.1" href="notes_0.5.1.html" /> 
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@@ -41,7 +41,7 @@
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+        «&#160;&#160;<a href="notes_0.5.1.html">Release Notes for OpenMC 0.5.1</a>
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         <p>
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+        «&#160;&#160;<a href="notes_0.5.1.html">Release Notes for OpenMC 0.5.1</a>
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@@ -107,7 +107,7 @@ tangent to a surface.</li>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
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+  <head>
+    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+    
+    <title>Release Notes for OpenMC 0.5.1 &mdash; OpenMC Documentation</title>
+    
+    <link rel="stylesheet" href="../_static/haiku.css" type="text/css" />
+    <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
+    <link rel="stylesheet" href="../_static/print.css" type="text/css" />
+    
+    <script type="text/javascript">
+      var DOCUMENTATION_OPTIONS = {
+        URL_ROOT:    '../',
+        VERSION:     '0.5.0',
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+        HAS_SOURCE:  true
+      };
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+    <script type="text/javascript" src="../_static/jquery.js"></script>
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+    <link rel="top" title="OpenMC Documentation" href="../index.html" />
+    <link rel="up" title="Release Notes" href="index.html" />
+    <link rel="next" title="Release Notes for OpenMC 0.5.0" href="notes_0.5.0.html" />
+    <link rel="prev" title="Release Notes" href="index.html" /> 
+  </head>
+  <body>
+      <div class="header">
+        <a href="../index.html">
+          <img class="logo" src="../_static/openmc.png" alt="Logo"/>
+        </a>
+      </div>
+      <div class="topnav">
+      
+        <p>
+        «&#160;&#160;<a href="index.html">Release Notes</a>
+        &#160;&#160;::&#160;&#160;
+        <a class="uplink" href="../index.html">Contents</a>
+        &#160;&#160;::&#160;&#160;
+        <a href="notes_0.5.0.html">Release Notes for OpenMC 0.5.0</a>&#160;&#160;»
+        </p>
+
+      </div>
+      <div class="content">
+        
+        
+  <div class="section" id="release-notes-for-openmc-0-5-1">
+<span id="notes-0-5-1"></span><h1>Release Notes for OpenMC 0.5.1<a class="headerlink" href="#release-notes-for-openmc-0-5-1" title="Permalink to this headline">¶</a></h1>
+<div class="admonition note">
+<p class="first admonition-title">Note</p>
+<p class="last">These release notes are for an upcoming release of OpenMC and are still
+subject to change.</p>
+</div>
+<div class="section" id="system-requirements">
+<h2>System Requirements<a class="headerlink" href="#system-requirements" title="Permalink to this headline">¶</a></h2>
+<p>There are no special requirements for running the OpenMC code. As of this
+release, OpenMC has been tested on a variety of Linux distributions, Mac OS X,
+and Microsoft Windows 7. Memory requirements will vary depending on the size of
+the problem at hand (mostly on the number of nuclides in the problem).</p>
+</div>
+<div class="section" id="new-features">
+<h2>New Features<a class="headerlink" href="#new-features" title="Permalink to this headline">¶</a></h2>
+<ul class="simple">
+<li>Proper install capability with &#8216;make install&#8217;.</li>
+<li>Lattices can now be 2 or 3 dimensions.</li>
+<li>New scatter-PN score type.</li>
+<li>New kappa-fission score type.</li>
+<li>Ability to tally any reaction by specifying MT.</li>
+</ul>
+</div>
+<div class="section" id="bug-fixes">
+<h2>Bug Fixes<a class="headerlink" href="#bug-fixes" title="Permalink to this headline">¶</a></h2>
+<ul class="simple">
+<li><a class="reference external" href="https://github.com/mit-crpg/openmc/commit/63bfd2">63bfd2</a>: Fix tracklength tallies with cell filter and universes.</li>
+<li><a class="reference external" href="https://github.com/mit-crpg/openmc/commit/88daf7">88daf7</a>: Fix analog tallies with survival biasing.</li>
+</ul>
+</div>
+</div>
+
+
+      </div>
+      <div class="bottomnav">
+      
+        <p>
+        «&#160;&#160;<a href="index.html">Release Notes</a>
+        &#160;&#160;::&#160;&#160;
+        <a class="uplink" href="../index.html">Contents</a>
+        &#160;&#160;::&#160;&#160;
+        <a href="notes_0.5.0.html">Release Notes for OpenMC 0.5.0</a>&#160;&#160;»
+        </p>
+
+      </div>
+
+
+    <div class="footer">
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
+      Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
+    </div>
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+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
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diff --git a/usersguide/beginners.html b/usersguide/beginners.html
index caeca2bc8c..82a9236336 100644
--- a/usersguide/beginners.html
+++ b/usersguide/beginners.html
@@ -185,7 +185,7 @@ and <a class="reference external" href="http://www.hss.doe.gov/nuclearsafety/tec
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/usersguide/index.html b/usersguide/index.html
index 9c2369471b..06d6bd5c8e 100644
--- a/usersguide/index.html
+++ b/usersguide/index.html
@@ -64,23 +64,23 @@ essential aspects of using OpenMC to perform neutronic simulations.</p>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="install.html">2. Installation and Configuration</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="install.html#prerequisites">2.1. Prerequisites</a></li>
-<li class="toctree-l2"><a class="reference internal" href="install.html#obtaining-the-source">2.2. Obtaining the Source</a></li>
-<li class="toctree-l2"><a class="reference internal" href="install.html#build-configuration">2.3. Build Configuration</a></li>
-<li class="toctree-l2"><a class="reference internal" href="install.html#compiling-on-linux-and-mac-os-x">2.4. Compiling on Linux and Mac OS X</a></li>
-<li class="toctree-l2"><a class="reference internal" href="install.html#compiling-on-windows">2.5. Compiling on Windows</a><ul>
-<li class="toctree-l3"><a class="reference internal" href="install.html#using-cygwin">2.5.1. Using Cygwin</a></li>
-<li class="toctree-l3"><a class="reference internal" href="install.html#using-mingw">2.5.2. Using MinGW</a></li>
+<li class="toctree-l2"><a class="reference internal" href="install.html#installing-on-ubuntu-with-ppa">2.1. Installing on Ubuntu with PPA</a></li>
+<li class="toctree-l2"><a class="reference internal" href="install.html#building-from-source">2.2. Building from Source</a><ul>
+<li class="toctree-l3"><a class="reference internal" href="install.html#prerequisites">2.2.1. Prerequisites</a></li>
+<li class="toctree-l3"><a class="reference internal" href="install.html#obtaining-the-source">2.2.2. Obtaining the Source</a></li>
+<li class="toctree-l3"><a class="reference internal" href="install.html#build-configuration">2.2.3. Build Configuration</a></li>
+<li class="toctree-l3"><a class="reference internal" href="install.html#compiling-on-linux-and-mac-os-x">2.2.4. Compiling on Linux and Mac OS X</a></li>
+<li class="toctree-l3"><a class="reference internal" href="install.html#compiling-on-windows">2.2.5. Compiling on Windows</a></li>
 </ul>
 </li>
-<li class="toctree-l2"><a class="reference internal" href="install.html#cross-section-configuration">2.6. Cross Section Configuration</a><ul>
-<li class="toctree-l3"><a class="reference internal" href="install.html#using-jeff-cross-sections-from-oecd-nea">2.6.1. Using JEFF Cross Sections from OECD/NEA</a></li>
-<li class="toctree-l3"><a class="reference internal" href="install.html#using-cross-sections-from-mcnp">2.6.2. Using Cross Sections from MCNP</a></li>
-<li class="toctree-l3"><a class="reference internal" href="install.html#using-cross-sections-from-serpent">2.6.3. Using Cross Sections from Serpent</a></li>
+<li class="toctree-l2"><a class="reference internal" href="install.html#cross-section-configuration">2.3. Cross Section Configuration</a><ul>
+<li class="toctree-l3"><a class="reference internal" href="install.html#using-jeff-cross-sections-from-oecd-nea">2.3.1. Using JEFF Cross Sections from OECD/NEA</a></li>
+<li class="toctree-l3"><a class="reference internal" href="install.html#using-cross-sections-from-mcnp">2.3.2. Using Cross Sections from MCNP</a></li>
+<li class="toctree-l3"><a class="reference internal" href="install.html#using-cross-sections-from-serpent">2.3.3. Using Cross Sections from Serpent</a></li>
 </ul>
 </li>
-<li class="toctree-l2"><a class="reference internal" href="install.html#running-openmc">2.7. Running OpenMC</a></li>
-<li class="toctree-l2"><a class="reference internal" href="install.html#configuring-input-validation-with-gnu-emacs-nxml-mode">2.8. Configuring Input Validation with GNU Emacs nXML mode</a></li>
+<li class="toctree-l2"><a class="reference internal" href="install.html#running-openmc">2.4. Running OpenMC</a></li>
+<li class="toctree-l2"><a class="reference internal" href="install.html#configuring-input-validation-with-gnu-emacs-nxml-mode">2.5. Configuring Input Validation with GNU Emacs nXML mode</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="input.html">3. Writing XML Input Files</a><ul>
@@ -182,7 +182,7 @@ essential aspects of using OpenMC to perform neutronic simulations.</p>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/usersguide/input.html b/usersguide/input.html
index 29dfda005d..7f25d564c4 100644
--- a/usersguide/input.html
+++ b/usersguide/input.html
@@ -901,7 +901,14 @@ secondary neutrons.</td>
 </tr>
 <tr class="field-odd field"><th class="field-name">nu-fission:</th><td class="field-body">Total production of neutrons due to fission</td>
 </tr>
-<tr class="field-even field"><th class="field-name">events:</th><td class="field-body">Number of scoring events</td>
+<tr class="field-even field"><th class="field-name">kappa-fission:</th><td class="field-body">The recoverable energy production rate due to fission. The recoverable
+energy is defined as the fission product kinetic energy, prompt and delayed neutron
+kinetic energies, prompt and delayed <img class="math" src="../_images/math/66981fa3920210c6ad8dbe5e968783d5dd7520c3.png" alt="\gamma"/>-ray total energies,
+and the total energy released by the delayed <img class="math" src="../_images/math/fdb63b9e51abe6bbb16acfb5d7b773ddbb5bf4a8.png" alt="\beta"/> particles. The
+neutrino energy does not contribute to this response. The prompt and delayed
+<img class="math" src="../_images/math/66981fa3920210c6ad8dbe5e968783d5dd7520c3.png" alt="\gamma"/>-rays are assumed to deposit their energy locally.</td>
+</tr>
+<tr class="field-odd field"><th class="field-name">events:</th><td class="field-body">Number of scoring events</td>
 </tr>
 </tbody>
 </table>
@@ -1274,7 +1281,7 @@ turned on with &#8220;true&#8221; and off with &#8220;false&#8221;.</p>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/usersguide/install.html b/usersguide/install.html
index af5a87dc13..73c8f4a3ca 100644
--- a/usersguide/install.html
+++ b/usersguide/install.html
@@ -54,35 +54,77 @@
         
   <div class="section" id="installation-and-configuration">
 <span id="usersguide-install"></span><h1>2. Installation and Configuration<a class="headerlink" href="#installation-and-configuration" title="Permalink to this headline">¶</a></h1>
+<div class="section" id="installing-on-ubuntu-with-ppa">
+<h2>2.1. Installing on Ubuntu with PPA<a class="headerlink" href="#installing-on-ubuntu-with-ppa" title="Permalink to this headline">¶</a></h2>
+<p>For users with Ubuntu 11.10 or later, a binary package for OpenMC is available
+through a Personal Package Archive (PPA) and can be installed through the APT
+package manager. First, add the following PPA to the repository sources:</p>
+<div class="highlight-sh"><div class="highlight"><pre>sudo apt-add-repository ppa:paulromano/staging
+</pre></div>
+</div>
+<p>Next, resynchronize the package index files:</p>
+<div class="highlight-sh"><div class="highlight"><pre>sudo apt-get update
+</pre></div>
+</div>
+<p>Now OpenMC should be recognized within the repository and can be installed:</p>
+<div class="highlight-sh"><div class="highlight"><pre>sudo apt-get install openmc
+</pre></div>
+</div>
+</div>
+<div class="section" id="building-from-source">
+<h2>2.2. Building from Source<a class="headerlink" href="#building-from-source" title="Permalink to this headline">¶</a></h2>
 <div class="section" id="prerequisites">
-<h2>2.1. Prerequisites<a class="headerlink" href="#prerequisites" title="Permalink to this headline">¶</a></h2>
-<p>In order to compile OpenMC, you will need to have a Fortran compiler installed
-on your machine. Since a number of Fortran 2003/2008 features are used in the
-code, it is recommended that you use the latest version of whatever compiler you
-choose. For <a class="reference external" href="http://gcc.gnu.org/wiki/GFortran">gfortran</a>, it is recommended that you use version 4.5.0 or above.</p>
-<p>If you are using Debian or a Debian derivative such as Ubuntu, you can install
-the gfortran compiler using the following command:</p>
+<h3>2.2.1. Prerequisites<a class="headerlink" href="#prerequisites" title="Permalink to this headline">¶</a></h3>
+<div class="admonition-required admonition">
+<p class="first admonition-title">Required</p>
+<ul class="last">
+<li><p class="first">A Fortran compiler such as <a class="reference external" href="http://gcc.gnu.org/wiki/GFortran">gfortran</a></p>
+<p>In order to compile OpenMC, you will need to have a Fortran compiler
+installed on your machine. Since a number of Fortran 2003/2008 features
+are used in the code, it is recommended that you use the latest version of
+whatever compiler you choose. For <a class="reference external" href="http://gcc.gnu.org/wiki/GFortran">gfortran</a>, it is necessary to use
+version 4.6.0 or above.</p>
+<p>If you are using Debian or a Debian derivative such as Ubuntu, you can
+install the gfortran compiler using the following command:</p>
 <div class="highlight-python"><pre>sudo apt-get install gfortran</pre>
 </div>
-<p>To compile with support for parallel runs on a distributed-memory architecture,
-you will need to have a valid implementation of MPI installed on your
-machine. The code has been tested and is known to work with the latest versions
-of both <a class="reference external" href="http://www.open-mpi.org">OpenMPI</a> and <a class="reference external" href="http://www.mcs.anl.gov/mpi/mpich/">MPICH2</a>. Note that if using OpenMPI, make sure that
-&#8211;with-mpi-f90-size is not set to medium or large since this may prevent MPI
-calls from completing successfully in OpenMC. OpenMPI and/or MPICH2 can be
-installed on Debian derivatives with:</p>
+</li>
+</ul>
+</div>
+<div class="admonition-optional admonition">
+<p class="first admonition-title">Optional</p>
+<ul class="last">
+<li><p class="first">An MPI implementation for distributed-memory parallel runs</p>
+<p>To compile with support for parallel runs on a distributed-memory
+architecture, you will need to have a valid implementation of MPI
+installed on your machine. The code has been tested and is known to work
+with the latest versions of both <a class="reference external" href="http://www.open-mpi.org">OpenMPI</a> and <a class="reference external" href="http://www.mcs.anl.gov/mpi/mpich/">MPICH2</a>. Note that if using
+OpenMPI, make sure that &#8211;with-mpi-f90-size is not set to medium or large
+since this may prevent MPI calls from completing successfully in
+OpenMC. OpenMPI and/or MPICH2 can be installed on Debian derivatives
+with:</p>
 <div class="highlight-python"><pre>sudo apt-get install mpich2
 sudo apt-get install openmpi-bin</pre>
 </div>
-<p>To compile with support for <a class="reference external" href="http://www.hdfgroup.org/HDF5/">HDF5</a> output (highly recommended), you will need to
-have HDF5 installed on your computer. The installed version will need to have
-been compiled with the same compiler you intend to compile OpenMC with.</p>
-<p>To enable CMFD acceleration, you will need to have <a class="reference external" href="http://www.mcs.anl.gov/petsc/">PETSc</a> installed on your
-computer. The installed version will need to have been compiled with the same
-compiler you intend to compile OpenMC with.</p>
+</li>
+<li><p class="first"><a class="reference external" href="http://www.hdfgroup.org/HDF5/">HDF5</a> Library for portable binary output format</p>
+<p>To compile with support for <a class="reference external" href="http://www.hdfgroup.org/HDF5/">HDF5</a> output (highly recommended), you will
+need to have HDF5 installed on your computer. The installed version will
+need to have been compiled with the same compiler you intend to compile
+OpenMC with.</p>
+</li>
+<li><p class="first"><a class="reference external" href="http://www.mcs.anl.gov/petsc/">PETSc</a> for CMFD acceleration</p>
+<p>To enable CMFD acceleration, you will need to have <a class="reference external" href="http://www.mcs.anl.gov/petsc/">PETSc</a> installed on
+your computer. The installed version will need to have been compiled with
+the same compiler you intend to compile OpenMC with.</p>
+</li>
+<li><p class="first"><a class="reference external" href="http://git-scm.com">git</a> version control software for obtaining source code</p>
+</li>
+</ul>
+</div>
 </div>
 <div class="section" id="obtaining-the-source">
-<h2>2.2. Obtaining the Source<a class="headerlink" href="#obtaining-the-source" title="Permalink to this headline">¶</a></h2>
+<h3>2.2.2. Obtaining the Source<a class="headerlink" href="#obtaining-the-source" title="Permalink to this headline">¶</a></h3>
 <p>All OpenMC source code is hosted on <a class="reference external" href="https://github.com/mit-crpg/openmc">GitHub</a>. You can download the source code
 directly from GitHub or, if you have the <a class="reference external" href="http://git-scm.com">git</a> version control software installed
 on your computer, you can use git to obtain the source code. The latter method
@@ -95,7 +137,7 @@ repository:</p>
 </div>
 </div>
 <div class="section" id="build-configuration">
-<h2>2.3. Build Configuration<a class="headerlink" href="#build-configuration" title="Permalink to this headline">¶</a></h2>
+<h3>2.2.3. Build Configuration<a class="headerlink" href="#build-configuration" title="Permalink to this headline">¶</a></h3>
 <p>All configuration for OpenMC is done within the Makefile located in
 <tt class="docutils literal"><span class="pre">src/Makefile</span></tt>. In the Makefile, you will see that there are a number of User
 Options which can be changed. It is recommended that you do not change anything
@@ -132,19 +174,21 @@ Makefile, you can enter the following from a terminal:</p>
 </div>
 </div>
 <div class="section" id="compiling-on-linux-and-mac-os-x">
-<h2>2.4. Compiling on Linux and Mac OS X<a class="headerlink" href="#compiling-on-linux-and-mac-os-x" title="Permalink to this headline">¶</a></h2>
+<h3>2.2.4. Compiling on Linux and Mac OS X<a class="headerlink" href="#compiling-on-linux-and-mac-os-x" title="Permalink to this headline">¶</a></h3>
 <p>To compile OpenMC on Linux or Max OS X, run the following commands from within
 the root directory of the source code:</p>
 <div class="highlight-sh"><div class="highlight"><pre><span class="nb">cd </span>src
 make
+sudo make install
 </pre></div>
 </div>
-<p>This will build an executable named <tt class="docutils literal"><span class="pre">openmc</span></tt>.</p>
+<p>This will build an executable named <tt class="docutils literal"><span class="pre">openmc</span></tt> and install it (by default in
+/usr/local/bin).</p>
 </div>
 <div class="section" id="compiling-on-windows">
-<h2>2.5. Compiling on Windows<a class="headerlink" href="#compiling-on-windows" title="Permalink to this headline">¶</a></h2>
+<h3>2.2.5. Compiling on Windows<a class="headerlink" href="#compiling-on-windows" title="Permalink to this headline">¶</a></h3>
 <div class="section" id="using-cygwin">
-<h3>2.5.1. Using Cygwin<a class="headerlink" href="#using-cygwin" title="Permalink to this headline">¶</a></h3>
+<h4>2.2.5.1. Using Cygwin<a class="headerlink" href="#using-cygwin" title="Permalink to this headline">¶</a></h4>
 <p>One option for compiling OpenMC on a Windows operating system is to use <a class="reference external" href="http://cygwin.com/">Cygwin</a>,
 a Linux-like environment for Windows. You will need to first <a class="reference external" href="http://cygwin.com/setup.exe">install
 Cygwin</a>. When you are asked to select packages, make sure the following are
@@ -176,7 +220,7 @@ make
 <p>This will build an executable named <tt class="docutils literal"><span class="pre">openmc</span></tt>.</p>
 </div>
 <div class="section" id="using-mingw">
-<h3>2.5.2. Using MinGW<a class="headerlink" href="#using-mingw" title="Permalink to this headline">¶</a></h3>
+<h4>2.2.5.2. Using MinGW<a class="headerlink" href="#using-mingw" title="Permalink to this headline">¶</a></h4>
 <p>An alternate option for installing OpenMC on Windows is using <a class="reference external" href="http://www.mingw.org">MinGW</a>, which
 stands for Minimalist GNU for Windows. An executable for installing the MinGW
 distribution is available on <a class="reference external" href="http://sourceforge.net/projects/mingw">SourceForge</a>. When installing MinGW, make sure the
@@ -196,14 +240,15 @@ make
 <p>This will build an executable named <tt class="docutils literal"><span class="pre">openmc</span></tt>.</p>
 </div>
 </div>
+</div>
 <div class="section" id="cross-section-configuration">
-<h2>2.6. Cross Section Configuration<a class="headerlink" href="#cross-section-configuration" title="Permalink to this headline">¶</a></h2>
+<h2>2.3. Cross Section Configuration<a class="headerlink" href="#cross-section-configuration" title="Permalink to this headline">¶</a></h2>
 <p>In order to run a simulation with OpenMC, you will need cross section data for
 each nuclide in your problem. Since OpenMC uses ACE format cross sections, you
 can use nuclear data that was processed with NJOY, such as that distributed with
 <a class="reference external" href="http://mcnp.lanl.gov">MCNP</a> or <a class="reference external" href="http://montecarlo.vtt.fi">Serpent</a>.</p>
 <div class="section" id="using-jeff-cross-sections-from-oecd-nea">
-<h3>2.6.1. Using JEFF Cross Sections from OECD/NEA<a class="headerlink" href="#using-jeff-cross-sections-from-oecd-nea" title="Permalink to this headline">¶</a></h3>
+<h3>2.3.1. Using JEFF Cross Sections from OECD/NEA<a class="headerlink" href="#using-jeff-cross-sections-from-oecd-nea" title="Permalink to this headline">¶</a></h3>
 <p>The <a class="reference external" href="http://www.oecd-nea.org">NEA</a> provides processed ACE data from the <a class="reference external" href="http://www.oecd-nea.org/dbdata/jeff/">JEFF</a> nuclear library upon
 request. A DVD of the data can be requested <a class="reference external" href="http://www.oecd-nea.org/dbdata/pubs/jeff312-cd.html">here</a>. To use this data with OpenMC,
 the following steps must be taken:</p>
@@ -233,7 +278,7 @@ within the <tt class="docutils literal"><span class="pre">cross_sections.xml</sp
 </ol>
 </div>
 <div class="section" id="using-cross-sections-from-mcnp">
-<h3>2.6.2. Using Cross Sections from MCNP<a class="headerlink" href="#using-cross-sections-from-mcnp" title="Permalink to this headline">¶</a></h3>
+<h3>2.3.2. Using Cross Sections from MCNP<a class="headerlink" href="#using-cross-sections-from-mcnp" title="Permalink to this headline">¶</a></h3>
 <p>To use cross sections distributed with MCNP, change the &lt;directory&gt; element in
 the <tt class="docutils literal"><span class="pre">cross_sections.xml</span></tt> file in the root directory of the OpenMC distribution
 to the location of the MCNP cross sections. Then, either set the
@@ -241,7 +286,7 @@ to the location of the MCNP cross sections. Then, either set the
 environment variable to the absolute path of the <tt class="docutils literal"><span class="pre">cross_sections.xml</span></tt> file.</p>
 </div>
 <div class="section" id="using-cross-sections-from-serpent">
-<h3>2.6.3. Using Cross Sections from Serpent<a class="headerlink" href="#using-cross-sections-from-serpent" title="Permalink to this headline">¶</a></h3>
+<h3>2.3.3. Using Cross Sections from Serpent<a class="headerlink" href="#using-cross-sections-from-serpent" title="Permalink to this headline">¶</a></h3>
 <p>To use cross sections distributed with Serpent, change the &lt;directory&gt; element
 in the <tt class="docutils literal"><span class="pre">cross_sections_serpent.xml</span></tt> file in the root directory of the OpenMC
 distribution to the location of the Serpent cross sections. Then, either set the
@@ -251,7 +296,7 @@ file.</p>
 </div>
 </div>
 <div class="section" id="running-openmc">
-<h2>2.7. Running OpenMC<a class="headerlink" href="#running-openmc" title="Permalink to this headline">¶</a></h2>
+<h2>2.4. Running OpenMC<a class="headerlink" href="#running-openmc" title="Permalink to this headline">¶</a></h2>
 <p>Once you have a model built (see <a class="reference internal" href="input.html#usersguide-input"><em>Writing XML Input Files</em></a>), you can either run
 the openmc executable directly from the directory containing your XML input
 files, or you can specify as a command-line argument the directory containing
@@ -270,7 +315,7 @@ openmc
 working directory which may be different from <tt class="docutils literal"><span class="pre">/home/username/somemodel</span></tt>.</p>
 </div>
 <div class="section" id="configuring-input-validation-with-gnu-emacs-nxml-mode">
-<h2>2.8. Configuring Input Validation with GNU Emacs nXML mode<a class="headerlink" href="#configuring-input-validation-with-gnu-emacs-nxml-mode" title="Permalink to this headline">¶</a></h2>
+<h2>2.5. Configuring Input Validation with GNU Emacs nXML mode<a class="headerlink" href="#configuring-input-validation-with-gnu-emacs-nxml-mode" title="Permalink to this headline">¶</a></h2>
 <p>The <a class="reference external" href="http://www.gnu.org/software/emacs/">GNU Emacs</a> text editor has a built-in mode that extends functionality for
 editing XML files. One of the features in nXML mode is the ability to perform
 real-time <a class="reference external" href="http://en.wikipedia.org/wiki/XML_validation">validation</a> of XML files against a <a class="reference external" href="http://relaxng.org/">RELAX NG</a> schema. The OpenMC
@@ -303,7 +348,7 @@ schemas.xml file in your own OpenMC source directory.</p>
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">
diff --git a/usersguide/troubleshoot.html b/usersguide/troubleshoot.html
index 706295d140..2b21077a2d 100644
--- a/usersguide/troubleshoot.html
+++ b/usersguide/troubleshoot.html
@@ -155,7 +155,7 @@ has a collision. For example, if you received this error at cycle 5, generation
 
 
     <div class="footer">
-        &copy; Copyright 2011-2012, Massachusetts Institute of Technology.
+        &copy; Copyright 2011-2013, Massachusetts Institute of Technology.
       Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.3.
     </div>
 <script type="text/javascript">