Merge branch 'develop' into python3

This commit is contained in:
Paul Romano 2014-08-20 23:02:45 -04:00
commit b7e2b37f10
17 changed files with 192 additions and 84 deletions

View file

@ -167,28 +167,28 @@ if(petsc)
list(INSERT PETSC_PACKAGE_LIBS 0 ${PETSC_FLAPACK_LIB})
endif()
# If libdl wasn't found, search /usr/lib64
# If libdl wasn't found, search /usr/lib64
if(PETSC_DL_LIB STREQUAL "PETSC_DL_LIB-NOTFOUND")
find_library(PETSC_DL_LIB libdl.so /usr/lib64)
list(REMOVE_ITEM PETSC_PACKAGE_LIBS PETSC_DL_LIB-NOTFOUND)
list(INSERT PETSC_PACKAGE_LIBS 0 ${PETSC_DL_LIB})
endif()
# If libm wasn't found, search /usr/lib64
# If libm wasn't found, search /usr/lib64
if(PETSC_M_LIB STREQUAL "PETSC_M_LIB-NOTFOUND")
find_library(PETSC_M_LIB libm.so /usr/lib64)
list(REMOVE_ITEM PETSC_PACKAGE_LIBS PETSC_M_LIB-NOTFOUND)
list(INSERT PETSC_PACKAGE_LIBS 0 ${PETSC_M_LIB})
endif()
# If libpthread wasn't found, search /usr/lib64
# If libpthread wasn't found, search /usr/lib64
if(PETSC_PTHREAD_LIB STREQUAL "PETSC_PTHREAD_LIB-NOTFOUND")
find_library(PETSC_PTHREAD_LIB libpthread.so /usr/lib64)
list(REMOVE_ITEM PETSC_PACKAGE_LIBS PETSC_PTHREAD_LIB-NOTFOUND)
list(INSERT PETSC_PACKAGE_LIBS 0 ${PETSC_PTHREAD_LIB})
endif()
# If librt wasn't found, search /usr/lib64
# If librt wasn't found, search /usr/lib64
if(PETSC_RT_LIB STREQUAL "PETSC_RT_LIB-NOTFOUND")
find_library(PETSC_RT_LIB librt.so /usr/lib64)
list(REMOVE_ITEM PETSC_PACKAGE_LIBS PETSC_RT_LIB-NOTFOUND)
@ -213,7 +213,7 @@ execute_process(COMMAND git rev-parse HEAD
if(GIT_SHA1_SUCCESS EQUAL 0)
add_definitions(-DGIT_SHA1="${GIT_SHA1}")
endif()
#===============================================================================
# FoX Fortran XML Library
#===============================================================================
@ -300,7 +300,7 @@ foreach(test ${TESTS})
# Get test information
get_filename_component(TEST_NAME ${test} NAME)
get_filename_component(TEST_PATH ${test} PATH)
get_filename_component(TEST_PATH ${test} PATH)
# Check for running standard tests (no valgrind, no gcov)
if(NOT ${MEM_CHECK} AND NOT ${COVERAGE})
@ -309,15 +309,15 @@ foreach(test ${TESTS})
if (${MPI_ENABLED})
# Preform a parallel test
add_test(NAME ${TEST_NAME}
WORKING_DIRECTORY ${TEST_PATH}
add_test(NAME ${TEST_NAME}
WORKING_DIRECTORY ${TEST_PATH}
COMMAND ${PYTHON_EXECUTABLE} ${TEST_NAME} --exe $<TARGET_FILE:openmc>
--mpi_exec $ENV{MPI_DIR}/bin/mpiexec)
else(${MPI_ENABLED})
# Perform a serial test
add_test(NAME ${TEST_NAME}
add_test(NAME ${TEST_NAME}
WORKING_DIRECTORY ${TEST_PATH}
COMMAND ${PYTHON_EXECUTABLE} ${TEST_NAME} --exe $<TARGET_FILE:openmc>)
@ -342,11 +342,11 @@ foreach(test ${TESTS})
# Handle restart tests separately
if(${test} MATCHES "test_statepoint_restart")
set(RESTART_FILE statepoint.7.h5)
set(RESTART_FILE statepoint.07.h5)
elseif(${test} MATCHES "test_sourcepoint_restart")
set(RESTART_FILE statepoint.7.h5 source.7.h5)
set(RESTART_FILE statepoint.07.h5 source.07.h5)
elseif(${test} MATCHES "test_particle_restart")
set(RESTART_FILE particle_12_192.h5)
set(RESTART_FILE particle_12_885.h5)
else(${test} MATCHES "test_statepoint_restart")
message(FATAL_ERROR "Restart test ${test} not recognized")
endif(${test} MATCHES "test_statepoint_restart")
@ -355,11 +355,11 @@ foreach(test ${TESTS})
# Handle restart tests separately
if(${test} MATCHES "test_statepoint_restart")
set(RESTART_FILE statepoint.7.binary)
set(RESTART_FILE statepoint.07.binary)
elseif(${test} MATCHES "test_sourcepoint_restart")
set(RESTART_FILE statepoint.7.binary source.7.binary)
set(RESTART_FILE statepoint.07.binary source.07.binary)
elseif(${test} MATCHES "test_particle_restart")
set(RESTART_FILE particle_12_192.binary)
set(RESTART_FILE particle_12_885.binary)
else(${test} MATCHES "test_statepoint_restart")
message(FATAL_ERROR "Restart test ${test} not recognized")
endif(${test} MATCHES "test_statepoint_restart")

View file

@ -7,6 +7,7 @@ module ace
use error, only: fatal_error, warning
use fission, only: nu_total
use global
use list_header, only: ListElemInt
use material_header, only: Material
use output, only: write_message
use set_header, only: SetChar
@ -1428,4 +1429,31 @@ contains
end function get_real
!===============================================================================
! SAME_NUCLIDE_LIST creates a linked list for each nuclide containing the
! indices in the nuclides array of all other instances of that nuclide. For
! example, the same nuclide may exist at multiple temperatures resulting
! in multiple entries in the nuclides array for a single zaid number.
!===============================================================================
subroutine same_nuclide_list()
integer :: i ! index in nuclides array
integer :: j ! index in nuclides array
type(ListElemInt), pointer :: nuc_list => null() ! pointer to nuclide list
do i = 1, n_nuclides_total
allocate(nuclides(i) % nuc_list)
nuc_list => nuclides(i) % nuc_list
do j = 1, n_nuclides_total
if (nuclides(i) % zaid == nuclides(j) % zaid) then
nuc_list % data = j
allocate(nuc_list % next)
nuc_list => nuc_list % next
end if
end do
end do
end subroutine same_nuclide_list
end module ace

View file

@ -2,6 +2,7 @@ module ace_header
use constants, only: MAX_FILE_LEN
use endf_header, only: Tab1
use list_header, only: ListElemInt
implicit none
@ -95,6 +96,9 @@ module ace_header
real(8) :: awr ! weight of nucleus in neutron masses
real(8) :: kT ! temperature in MeV (k*T)
! Linked list of indices in nuclides array of instances of this same nuclide
type(ListElemInt), pointer :: nuc_list => null()
! Energy grid information
integer :: n_grid ! # of nuclide grid points
integer, allocatable :: grid_index(:) ! pointers to union grid
@ -241,6 +245,7 @@ module ace_header
! Information for URR probability table use
logical :: use_ptable ! in URR range with probability tables?
real(8) :: last_prn
end type NuclideMicroXS
!===============================================================================

View file

@ -5,6 +5,7 @@ module cross_section
use error, only: fatal_error
use fission, only: nu_total
use global
use list_header, only: ListElemInt
use material_header, only: Material
use particle_header, only: Particle
use random_lcg, only: prn
@ -184,6 +185,8 @@ contains
! Initialize sab treatment to false
micro_xs(i_nuclide) % index_sab = NONE
micro_xs(i_nuclide) % elastic_sab = ZERO
! Initialize URR probability table treatment to false
micro_xs(i_nuclide) % use_ptable = .false.
! Initialize nuclide cross-sections to zero
@ -348,10 +351,12 @@ contains
real(8) :: capture ! (n,gamma) cross section
real(8) :: fission ! fission cross section
real(8) :: inelastic ! inelastic cross section
type(UrrData), pointer, save :: urr => null()
type(Nuclide), pointer, save :: nuc => null()
type(Reaction), pointer, save :: rxn => null()
!$omp threadprivate(urr, nuc, rxn)
logical :: same_nuc ! do we know the xs for this nuclide at this energy?
type(UrrData), pointer, save :: urr => null()
type(Nuclide), pointer, save :: nuc => null()
type(Reaction), pointer, save :: rxn => null()
type(ListElemInt), pointer :: nuc_list => null()
!$omp threadprivate(urr, nuc, rxn, nuc_list)
micro_xs(i_nuclide) % use_ptable = .true.
@ -371,7 +376,28 @@ contains
(urr % energy(i_energy + 1) - urr % energy(i_energy))
! sample probability table using the cumulative distribution
r = prn()
! if we're dealing with a nuclide that we've previously encountered at
! this energy but a different temperature, use the original random number to
! preserve correlation of temperature in probability tables
same_nuc = .false.
nuc_list => nuc % nuc_list
do
if (E /= ZERO .and. E == micro_xs(nuc_list % data) % last_E) then
same_nuc = .true.
exit
end if
nuc_list => nuc_list % next
if (.not. associated(nuc_list % next)) exit
end do
if (same_nuc) then
r = micro_xs(nuc_list % data) % last_prn
else
r = prn()
micro_xs(i_nuclide) % last_prn = r
end if
i_low = 1
do
if (urr % prob(i_energy, URR_CUM_PROB, i_low) > r) exit

View file

@ -1,6 +1,6 @@
module initialize
use ace, only: read_xs
use ace, only: read_xs, same_nuclide_list
use bank_header, only: Bank
use constants
use dict_header, only: DictIntInt, ElemKeyValueII
@ -104,6 +104,9 @@ contains
call read_xs()
call time_read_xs % stop()
! Create linked lists for multiple instances of the same nuclide
call same_nuclide_list()
! Construct unionized energy grid from cross-sections
if (grid_method == GRID_UNION) then
call time_unionize % start()
@ -211,13 +214,13 @@ contains
call MPI_GET_ADDRESS(b % uvw, bank_disp(3), mpi_err)
call MPI_GET_ADDRESS(b % E, bank_disp(4), mpi_err)
! Adjust displacements
! Adjust displacements
bank_disp = bank_disp - bank_disp(1)
! Define MPI_BANK for fission sites
bank_blocks = (/ 1, 3, 3, 1 /)
bank_types = (/ MPI_REAL8, MPI_REAL8, MPI_REAL8, MPI_REAL8 /)
call MPI_TYPE_CREATE_STRUCT(4, bank_blocks, bank_disp, &
call MPI_TYPE_CREATE_STRUCT(4, bank_blocks, bank_disp, &
bank_types, MPI_BANK, mpi_err)
call MPI_TYPE_COMMIT(MPI_BANK, mpi_err)
@ -308,13 +311,9 @@ contains
integer :: argc ! number of command line arguments
integer :: last_flag ! index of last flag
integer :: filetype
character(MAX_FILE_LEN) :: pwd ! present working directory
character(MAX_WORD_LEN), allocatable :: argv(:) ! command line arguments
type(BinaryOutput) :: sp
! Get working directory
call GET_ENVIRONMENT_VARIABLE("PWD", pwd)
! Check number of command line arguments and allocate argv
argc = COMMAND_ARGUMENT_COUNT()
@ -414,7 +413,7 @@ contains
! Read number of threads
i = i + 1
#ifdef _OPENMP
#ifdef _OPENMP
! Read and set number of OpenMP threads
n_threads = int(str_to_int(argv(i)), 4)
if (n_threads < 1) then
@ -454,16 +453,12 @@ contains
! Determine directory where XML input files are
if (argc > 0 .and. last_flag < argc) then
path_input = argv(last_flag + 1)
! Need to add working directory if the given path is a relative path
if (.not. starts_with(path_input, "/")) then
path_input = trim(pwd) // "/" // trim(path_input)
end if
else
path_input = pwd
path_input = ''
end if
! Add slash at end of directory if it isn't there
if (.not. ends_with(path_input, "/")) then
if (.not. ends_with(path_input, "/") .and. len_trim(path_input) > 0) then
path_input = trim(path_input) // "/"
end if
@ -563,7 +558,7 @@ contains
integer :: m ! loop index for lattices
integer :: mid, lid ! material and lattice IDs
integer :: n_x, n_y, n_z ! size of lattice
integer :: i_array ! index in surfaces/materials array
integer :: i_array ! index in surfaces/materials array
integer :: id ! user-specified id
type(Cell), pointer :: c => null()
type(Lattice), pointer :: lat => null()
@ -634,7 +629,7 @@ contains
" specified on lattice " // trim(to_str(lid))
call fatal_error()
end if
else
message = "Specified fill " // trim(to_str(id)) // " on cell " // &
trim(to_str(c % id)) // " is neither a universe nor a lattice."
@ -805,7 +800,7 @@ contains
sum_percent = sum_percent + x*awr
end do
sum_percent = ONE / sum_percent
mat % density = -mat % density * N_AVOGADRO &
mat % density = -mat % density * N_AVOGADRO &
/ MASS_NEUTRON * sum_percent
end if
@ -866,7 +861,7 @@ contains
! Allocate source bank
allocate(source_bank(work), STAT=alloc_err)
! Check for allocation errors
! Check for allocation errors
if (alloc_err /= 0) then
message = "Failed to allocate source bank."
call fatal_error()
@ -894,7 +889,7 @@ contains
allocate(fission_bank(3*work), STAT=alloc_err)
#endif
! Check for allocation errors
! Check for allocation errors
if (alloc_err /= 0) then
message = "Failed to allocate fission bank."
call fatal_error()

View file

@ -16,7 +16,7 @@ module state_point
use error, only: fatal_error, warning
use global
use output, only: write_message, time_stamp
use string, only: to_str
use string, only: to_str, zero_padded, count_digits
use output_interface
use tally_header, only: TallyObject
@ -44,7 +44,7 @@ contains
! Set filename for state point
filename = trim(path_output) // 'statepoint.' // &
trim(to_str(current_batch))
& zero_padded(current_batch, count_digits(n_batches))
! Append appropriate extension
#ifdef HDF5
@ -305,7 +305,9 @@ contains
if (source_separate) then
! Set filename
filename = trim(path_output) // 'source.' // trim(to_str(current_batch))
filename = trim(path_output) // 'source.' // &
& zero_padded(current_batch, count_digits(n_batches))
#ifdef HDF5
filename = trim(filename) // '.h5'
#else
@ -326,7 +328,7 @@ contains
! Set filename for state point
filename = trim(path_output) // 'statepoint.' // &
trim(to_str(current_batch))
& zero_padded(current_batch, count_digits(n_batches))
#ifdef HDF5
filename = trim(filename) // '.h5'
#else

View file

@ -1,7 +1,7 @@
module string
use constants, only: MAX_WORDS, MAX_LINE_LEN, ERROR_INT, ERROR_REAL
use error, only: warning
use error, only: fatal_error, warning
use global, only: message
implicit none
@ -184,6 +184,39 @@ contains
end subroutine upper_case
!===============================================================================
! ZERO_PADDED returns a string of the input integer padded with zeros to the
! desired number of digits. Do not include the sign in n_digits for negative
! integers.
!===============================================================================
function zero_padded(num, n_digits) result(str)
integer, intent(in) :: num
integer, intent(in) :: n_digits
character(11) :: str
character(8) :: zp_form
! Make sure n_digits is reasonable. 10 digits is the maximum needed for the
! largest integer(4).
if (n_digits > 10) then
message = 'zero_padded called with an unreasonably large n_digits (>10)'
call fatal_error()
end if
! Write a format string of the form '(In.m)' where n is the max width and
! m is the min width. If a sign is present, then n must be one greater
! than m.
if (num < 0) then
write(zp_form, '("(I", I0, ".", I0, ")")') n_digits+1, n_digits
else
write(zp_form, '("(I", I0, ".", I0, ")")') n_digits, n_digits
end if
! Format the number.
write(str, zp_form) num
end function zero_padded
!===============================================================================
! IS_NUMBER determines whether a string of characters is all 0-9 characters
!===============================================================================
@ -268,6 +301,25 @@ contains
end function ends_with
!===============================================================================
! COUNT_DIGITS returns the number of digits needed to represent the input
! integer.
!===============================================================================
function count_digits(num) result(n_digits)
integer, intent(in) :: num
integer :: n_digits
n_digits = 1
do while (num / 10**(n_digits) /= 0 .and. abs(num / 10 **(n_digits-1)) /= 1&
&.and. n_digits /= 10)
! Note that 10 digits is the maximum needed to represent an integer(4) so
! the loop automatically exits when n_digits = 10.
n_digits = n_digits + 1
end do
end function count_digits
!===============================================================================
! INT4_TO_STR converts an integer(4) to a string.
!===============================================================================

View file

@ -10,7 +10,7 @@ import statepoint
if len(sys.argv) > 1:
sp = statepoint.StatePoint(sys.argv[1])
else:
sp = statepoint.StatePoint('statepoint.8.binary')
sp = statepoint.StatePoint('statepoint.08.binary')
sp.read_results()
sp.read_source()

View file

@ -30,7 +30,7 @@ def test_statepoint_exists():
'Statepoint file detected that is not binary or hdf5.'
def test_results():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.8.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.08.*'))
call(['python', 'results.py', statepoint[0]])
compare = filecmp.cmp('results_test.dat', 'results_true.dat')
if not compare:

View file

@ -10,7 +10,7 @@ import statepoint
if len(sys.argv) > 1:
sp = statepoint.StatePoint(sys.argv[1])
else:
sp = statepoint.StatePoint('statepoint.8.binary')
sp = statepoint.StatePoint('statepoint.08.binary')
sp.read_results()
sp.read_source()

View file

@ -30,7 +30,7 @@ def test_statepoint_exists():
'Statepoint file detected that is not binary or hdf5.'
def test_results():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.8.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.08.*'))
call(['python', 'results.py', statepoint[0]])
compare = filecmp.cmp('results_test.dat', 'results_true.dat')
if not compare:

View file

@ -28,7 +28,7 @@ def test_created_statepoint():
assert len(statepoint) == 2, '2 statepoint files must exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint file must either be binary or hdf5.'
sourcepoint = glob.glob(os.path.join(cwd, 'source.7.*'))
sourcepoint = glob.glob(os.path.join(cwd, 'source.07.*'))
assert len(sourcepoint) == 1, 'Either multiple or no source files found.'
assert sourcepoint[0].endswith('binary') or sourcepoint[0].endswith('h5'),\
'Source file must either be binary or hdf5.'
@ -43,8 +43,8 @@ def test_results():
os.remove(statepoint[0])
def test_restart_form1():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
sourcepoint = glob.glob(os.path.join(cwd, 'source.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
sourcepoint = glob.glob(os.path.join(cwd, 'source.07.*'))
if opts.mpi_exec != '':
proc = Popen([opts.mpi_exec, '-np', opts.mpi_np, opts.exe,
'-r', statepoint[0], sourcepoint[0], cwd], stderr=STDOUT, stdout=PIPE)
@ -70,8 +70,8 @@ def test_results_form1():
os.remove(statepoint[0])
def test_restart_form2():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
sourcepoint = glob.glob(os.path.join(cwd, 'source.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
sourcepoint = glob.glob(os.path.join(cwd, 'source.07.*'))
if opts.mpi_exec != '':
proc = Popen([opts.mpi_exec, '-np', opts.mpi_np, opts.exe,
'--restart', statepoint[0], sourcepoint[0], cwd], stderr=STDOUT, stdout=PIPE)
@ -97,8 +97,8 @@ def test_results_form2():
os.remove(statepoint[0])
def test_restart_serial():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
sourcepoint = glob.glob(os.path.join(cwd, 'source.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
sourcepoint = glob.glob(os.path.join(cwd, 'source.07.*'))
proc = Popen([opts.exe, '--restart', statepoint[0], sourcepoint[0], cwd], stderr=STDOUT, stdout=PIPE)
print(proc.communicate()[0])
returncode = proc.returncode

View file

@ -10,7 +10,7 @@ import statepoint
if len(sys.argv) > 1:
sp = statepoint.StatePoint(sys.argv[1])
else:
sp = statepoint.StatePoint('statepoint.9.binary')
sp = statepoint.StatePoint('statepoint.09.binary')
sp.read_results()
# set up output string

View file

@ -24,21 +24,21 @@ def test_run():
assert returncode == 0, 'OpenMC did not exit successfully.'
def test_statepoints_exist():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.3.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.3 files exist.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.03.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.03 files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint.3 file is not a binary or hdf5 file.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.6.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.6 files exist.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.06.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.06 files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint.6 file is not a binary or hdf5 file.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.9.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.9 files exist.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.09.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.09 files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint.9 file is not a binary or hdf5 file.'
def test_results():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.9.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.09.*'))
call(['python', 'results.py', statepoint[0]])
compare = filecmp.cmp('results_test.dat', 'results_true.dat')
if not compare:

View file

@ -25,20 +25,20 @@ def test_run():
assert returncode == 0, 'OpenMC did not exit successfully.'
def test_statepoints_exist():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.2.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.2 files exist.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.02.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.02 files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint.2 file is not a binary or hdf5 file.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.4.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.4 files exist.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.04.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.04 files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint.4 file is not a binary or hdf5 file.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.6.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.6 files exist.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.06.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.06 files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint.6 file is not a binary or hdf5 file.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.8.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.8 files exist.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.08.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint.08 files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint.8 file is not a binary or hdf5 file.'
statepoint = glob.glob(os.path.join(cwd, 'statepoint.10.*'))

View file

@ -11,7 +11,7 @@ import statepoint
if len(sys.argv) > 1:
sp = statepoint.StatePoint(sys.argv[1])
else:
sp = statepoint.StatePoint('statepoint.7.binary')
sp = statepoint.StatePoint('statepoint.07.binary')
sp.read_results()
# extract tally results and convert to vector

View file

@ -24,13 +24,13 @@ def test_run():
assert returncode == 0, 'OpenMC did not exit successfully.'
def test_created_statepoint():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint file is not a binary or hdf5 file.'
def test_results():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
call(['python', 'results.py', statepoint[0]])
compare = filecmp.cmp('results_test.dat', 'results_true.dat')
if not compare:
@ -38,7 +38,7 @@ def test_results():
assert compare, 'Initial test results do not agree.'
def test_restart_form1():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
if opts.mpi_exec != '':
proc = Popen([opts.mpi_exec, '-np', opts.mpi_np, opts.exe,
'-r', statepoint[0], cwd], stderr=STDOUT, stdout=PIPE)
@ -49,13 +49,13 @@ def test_restart_form1():
assert returncode == 0, 'OpenMC restart 1 did not exit successfully.'
def test_created_statepoint_form1():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint file is not a binary or hdf5 file.'
def test_results_form1():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
call(['python', 'results.py', statepoint[0]])
compare = filecmp.cmp('results_test.dat', 'results_true.dat')
if not compare:
@ -63,7 +63,7 @@ def test_results_form1():
assert compare, 'Restart 1 test results do not agree.'
def test_restart_form2():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
if opts.mpi_exec != '':
proc = Popen([opts.mpi_exec, '-np', opts.mpi_np, opts.exe,
'--restart', statepoint[0], cwd], stderr=STDOUT, stdout=PIPE)
@ -74,13 +74,13 @@ def test_restart_form2():
assert returncode == 0, 'OpenMC restart 2 did not exit successfully.'
def test_created_statepoint_form2():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint file is not a binary or hdf5 file.'
def test_results_form2():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
call(['python', 'results.py', statepoint[0]])
compare = filecmp.cmp('results_test.dat', 'results_true.dat')
if not compare:
@ -88,20 +88,20 @@ def test_results_form2():
assert compare, 'Restart 2 test results do not agree.'
def test_restart_serial():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
proc = Popen([opts.exe, '--restart', statepoint[0], cwd], stderr=STDOUT, stdout=PIPE)
print(proc.communicate()[0])
returncode = proc.returncode
assert returncode == 0, 'OpenMC restart serial did not exit successfully.'
def test_created_statepoint_serial():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
assert len(statepoint) == 1, 'Either multiple or no statepoint files exist.'
assert statepoint[0].endswith('binary') or statepoint[0].endswith('h5'),\
'Statepoint file is not a binary or hdf5 file.'
def test_results_serial():
statepoint = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
statepoint = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
call(['python', 'results.py', statepoint[0]])
compare = filecmp.cmp('results_test.dat', 'results_true.dat')
if not compare:
@ -109,7 +109,7 @@ def test_results_serial():
assert compare, 'Restart serial test results do not agree.'
def teardown():
output = glob.glob(os.path.join(cwd, 'statepoint.7.*'))
output = glob.glob(os.path.join(cwd, 'statepoint.07.*'))
output.append(os.path.join(cwd, 'results_test.dat'))
for f in output:
if os.path.exists(f):