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Updated IPython Notebook examples to use new Python API Region abstraction

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This commit is contained in:
Will Boyd 2015-10-12 23:56:13 -04:00
parent b9a439da11
commit ebe8ac3902
4 changed files with 83 additions and 224 deletions
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73
docs/source/pythonapi/examples/multi-group-cross-sections.ipynb
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docs/source/pythonapi/examples/pandas-dataframes.ipynb
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74
docs/source/pythonapi/examples/post-processing.ipynb
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@ -159,18 +159,7 @@
"metadata": {
"collapsed": false
},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:199: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:199: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:199: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:199: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n"
]
}
],
"outputs": [],
"source": [
"# Create a Universe to encapsulate a fuel pin\n",
"pin_cell_universe = openmc.Universe(name='1.6% Fuel Pin')\n",
@ -178,20 +167,19 @@
"# Create fuel Cell\n",
"fuel_cell = openmc.Cell(name='1.6% Fuel')\n",
"fuel_cell.fill = fuel\n",
"fuel_cell.add_surface(fuel_outer_radius, halfspace=-1)\n",
"fuel_cell.region = -fuel_outer_radius\n",
"pin_cell_universe.add_cell(fuel_cell)\n",
"\n",
"# Create a clad Cell\n",
"clad_cell = openmc.Cell(name='1.6% Clad')\n",
"clad_cell.fill = zircaloy\n",
"clad_cell.add_surface(fuel_outer_radius, halfspace=+1)\n",
"clad_cell.add_surface(clad_outer_radius, halfspace=-1)\n",
"clad_cell.region = +fuel_outer_radius & -clad_outer_radius\n",
"pin_cell_universe.add_cell(clad_cell)\n",
"\n",
"# Create a moderator Cell\n",
"moderator_cell = openmc.Cell(name='1.6% Moderator')\n",
"moderator_cell.fill = water\n",
"moderator_cell.add_surface(clad_outer_radius, halfspace=+1)\n",
"moderator_cell.region = +clad_outer_radius\n",
"pin_cell_universe.add_cell(moderator_cell)"
]
},
@ -208,32 +196,14 @@
"metadata": {
"collapsed": false
},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:199: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:199: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:199: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:199: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:199: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:199: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n"
]
}
],
"outputs": [],
"source": [
"# Create root Cell\n",
"root_cell = openmc.Cell(name='root cell')\n",
"root_cell.fill = pin_cell_universe\n",
"\n",
"# Add boundary planes\n",
"root_cell.add_surface(min_x, halfspace=+1)\n",
"root_cell.add_surface(max_x, halfspace=-1)\n",
"root_cell.add_surface(min_y, halfspace=+1)\n",
"root_cell.add_surface(max_y, halfspace=-1)\n",
"root_cell.add_surface(min_z, halfspace=+1)\n",
"root_cell.add_surface(max_z, halfspace=-1)\n",
"root_cell.region = +min_x & -max_x & +min_y & -max_y & +min_z & -max_z\n",
"\n",
"# Create root Universe\n",
"root_universe = openmc.Universe(universe_id=0, name='root universe')\n",
@ -377,7 +347,7 @@
"outputs": [
{
"data": {
"image/png": "iVBORw0KGgoAAAANSUhEUgAAAPoAAAD6AgMAAAD1grKuAAAABGdBTUEAALGPC/xhBQAAAAFzUkdC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\nVDEzOjQyOjIwLTA0OjAw2S7pigAAAABJRU5ErkJggg==\n",
"image/png": "iVBORw0KGgoAAAANSUhEUgAAAPoAAAD6AgMAAAD1grKuAAAABGdBTUEAALGPC/xhBQAAAAFzUkdC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\nVDIzOjUxOjAwLTA0OjAwvsbegAAAAABJRU5ErkJggg==\n",
"text/plain": [
"<IPython.core.display.Image object>"
]
@ -488,8 +458,8 @@
" Copyright: 2011-2015 Massachusetts Institute of Technology\n",
" License: http://mit-crpg.github.io/openmc/license.html\n",
" Version: 0.7.0\n",
" Git SHA1: 23535afa1c69644bb299bde18a094c3b99d53ae0\n",
" Date/Time: 2015-10-08 13:42:20\n",
" Git SHA1: 170155e8d7935b57fad57bfad6aff1034a80206e\n",
" Date/Time: 2015-10-12 23:51:01\n",
" MPI Processes: 1\n",
"\n",
" ===========================================================================\n",
@ -537,31 +507,7 @@
" 19/1 1.00071 1.04214 +/- 0.00800\n",
" 20/1 1.05587 1.04351 +/- 0.00729\n",
" 21/1 1.03886 1.04309 +/- 0.00660\n",
" 22/1 1.04335 1.04311 +/- 0.00603\n",
" 23/1 1.04057 1.04292 +/- 0.00555\n",
" 24/1 1.01976 1.04126 +/- 0.00540\n",
" 25/1 1.05811 1.04238 +/- 0.00515\n",
" 26/1 1.02351 1.04120 +/- 0.00496\n",
" 27/1 1.05261 1.04188 +/- 0.00471\n",
" 28/1 1.03355 1.04141 +/- 0.00446\n",
" 29/1 1.02797 1.04071 +/- 0.00428\n",
" 30/1 1.03758 1.04055 +/- 0.00406\n",
" 31/1 1.04883 1.04094 +/- 0.00388\n",
" 32/1 1.03557 1.04070 +/- 0.00371\n",
" 33/1 1.02947 1.04021 +/- 0.00358\n",
" 34/1 1.03651 1.04006 +/- 0.00343\n",
" 35/1 1.03331 1.03979 +/- 0.00330\n",
" 36/1 1.05947 1.04054 +/- 0.00326\n",
" 37/1 1.05093 1.04093 +/- 0.00316\n",
" 38/1 1.06787 1.04189 +/- 0.00319\n",
" 39/1 1.01451 1.04095 +/- 0.00322\n",
" 40/1 1.02351 1.04037 +/- 0.00317\n",
" 41/1 1.04826 1.04062 +/- 0.00307\n",
" 42/1 1.04228 1.04067 +/- 0.00298\n",
" 43/1 1.03214 1.04041 +/- 0.00290\n",
" 44/1 1.04950 1.04068 +/- 0.00282\n",
" 45/1 1.06616 1.04141 +/- 0.00284\n",
" 46/1 1.07039 1.04221 +/- 0.00287\n"
" 22/1 1.04335 1.04311 +/- 0.00603\n"
]
}
],

74
docs/source/pythonapi/examples/tally-arithmetic.ipynb
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@ -174,18 +174,7 @@
"metadata": {
"collapsed": false
},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:223: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:223: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:223: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:223: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n"
]
}
],
"outputs": [],
"source": [
"# Create a Universe to encapsulate a fuel pin\n",
"pin_cell_universe = openmc.Universe(name='1.6% Fuel Pin')\n",
@ -193,20 +182,19 @@
"# Create fuel Cell\n",
"fuel_cell = openmc.Cell(name='1.6% Fuel')\n",
"fuel_cell.fill = fuel\n",
"fuel_cell.add_surface(fuel_outer_radius, halfspace=-1)\n",
"fuel_cell.region = -fuel_outer_radius\n",
"pin_cell_universe.add_cell(fuel_cell)\n",
"\n",
"# Create a clad Cell\n",
"clad_cell = openmc.Cell(name='1.6% Clad')\n",
"clad_cell.fill = zircaloy\n",
"clad_cell.add_surface(fuel_outer_radius, halfspace=+1)\n",
"clad_cell.add_surface(clad_outer_radius, halfspace=-1)\n",
"clad_cell.region = +fuel_outer_radius & -clad_outer_radius\n",
"pin_cell_universe.add_cell(clad_cell)\n",
"\n",
"# Create a moderator Cell\n",
"moderator_cell = openmc.Cell(name='1.6% Moderator')\n",
"moderator_cell.fill = water\n",
"moderator_cell.add_surface(clad_outer_radius, halfspace=+1)\n",
"moderator_cell.region = +clad_outer_radius\n",
"pin_cell_universe.add_cell(moderator_cell)"
]
},
@ -223,32 +211,14 @@
"metadata": {
"collapsed": false
},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:223: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:223: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:223: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:223: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:223: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n",
"/usr/local/lib/python2.7/dist-packages/openmc-0.7.0-py2.7.egg/openmc/universe.py:223: DeprecationWarning: Cell.add_surface(...) has been deprecated and may be removed in a future version. The region for a Cell should be defined using the region property directly.\n"
]
}
],
"outputs": [],
"source": [
"# Create root Cell\n",
"root_cell = openmc.Cell(name='root cell')\n",
"root_cell.fill = pin_cell_universe\n",
"\n",
"# Add boundary planes\n",
"root_cell.add_surface(min_x, halfspace=+1)\n",
"root_cell.add_surface(max_x, halfspace=-1)\n",
"root_cell.add_surface(min_y, halfspace=+1)\n",
"root_cell.add_surface(max_y, halfspace=-1)\n",
"root_cell.add_surface(min_z, halfspace=+1)\n",
"root_cell.add_surface(max_z, halfspace=-1)\n",
"root_cell.region = +min_x & -max_x & +min_y & -max_y & +min_z & -max_z\n",
"\n",
"# Create root Universe\n",
"root_universe = openmc.Universe(universe_id=0, name='root universe')\n",
@ -393,7 +363,7 @@
"outputs": [
{
"data": {
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"text/plain": [
"<IPython.core.display.Image object>"
]
@ -603,8 +573,8 @@
" Copyright: 2011-2015 Massachusetts Institute of Technology\n",
" License: http://mit-crpg.github.io/openmc/license.html\n",
" Version: 0.7.0\n",
" Git SHA1: 23535afa1c69644bb299bde18a094c3b99d53ae0\n",
" Date/Time: 2015-10-08 16:09:59\n",
" Git SHA1: 170155e8d7935b57fad57bfad6aff1034a80206e\n",
" Date/Time: 2015-10-12 23:52:08\n",
" MPI Processes: 1\n",
"\n",
" ===========================================================================\n",
@ -660,20 +630,20 @@
"\n",
" =======================> TIMING STATISTICS <=======================\n",
"\n",
" Total time for initialization = 4.0200E-01 seconds\n",
" Reading cross sections = 9.5000E-02 seconds\n",
" Total time in simulation = 1.5664E+01 seconds\n",
" Time in transport only = 1.5652E+01 seconds\n",
" Time in inactive batches = 2.3940E+00 seconds\n",
" Time in active batches = 1.3270E+01 seconds\n",
" Time synchronizing fission bank = 3.0000E-03 seconds\n",
" Sampling source sites = 1.0000E-03 seconds\n",
" SEND/RECV source sites = 1.0000E-03 seconds\n",
" Total time for initialization = 4.1300E-01 seconds\n",
" Reading cross sections = 9.6000E-02 seconds\n",
" Total time in simulation = 1.6248E+01 seconds\n",
" Time in transport only = 1.6236E+01 seconds\n",
" Time in inactive batches = 2.3150E+00 seconds\n",
" Time in active batches = 1.3933E+01 seconds\n",
" Time synchronizing fission bank = 0.0000E+00 seconds\n",
" Sampling source sites = 0.0000E+00 seconds\n",
" SEND/RECV source sites = 0.0000E+00 seconds\n",
" Time accumulating tallies = 0.0000E+00 seconds\n",
" Total time for finalization = 1.0000E-03 seconds\n",
" Total time elapsed = 1.6076E+01 seconds\n",
" Calculation Rate (inactive) = 5221.39 neutrons/second\n",
" Calculation Rate (active) = 2825.92 neutrons/second\n",
" Total time for finalization = 2.0000E-03 seconds\n",
" Total time elapsed = 1.6672E+01 seconds\n",
" Calculation Rate (inactive) = 5399.57 neutrons/second\n",
" Calculation Rate (active) = 2691.45 neutrons/second\n",
"\n",
" ============================> RESULTS <============================\n",
"\n",