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Update documentation relating to test suite
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Paul Romano
parent
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commit
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6 changed files with 79 additions and 195 deletions
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@ -10,9 +10,10 @@ as debugging.
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.. toctree::
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:numbered:
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:maxdepth: 3
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:maxdepth: 2
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styleguide
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workflow
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tests
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user-input
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docbuild
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73
docs/source/devguide/tests.rst
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73
docs/source/devguide/tests.rst
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@ -0,0 +1,73 @@
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.. _devguide_tests:
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==========
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Test Suite
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==========
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Running Tests
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-------------
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The OpenMC test suite consists of two parts, a regression test suite and a unit
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test suite. The regression test suite is based on regression or integrated
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testing where different types of input files are configured and the full OpenMC
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code is executed. Results from simulations are compared with expected
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results. The unit tests are primarily intended to test individual
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functions/classes in the OpenMC Python API.
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The test suite relies on the third-party `pytest <https://pytest.org>`_
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package. To run either or both the regression and unit test suites, it is
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assumed that you have OpenMC fully installed, i.e., the :ref:`scripts_openmc`
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executable is available on your :envvar:`PATH` and the :mod:`openmc` Python
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module is importable. In development where it would be onerous to continually
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install OpenMC every time a small change is made, it is recommended to install
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OpenMC in development/editable mode. With setuptools, this is accomplished by
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running::
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python setup.py develop
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or using pip (recommended)::
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pip install -e .[test]
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It is also assumed that you have cross section data available that is pointed to
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by the :envvar:`OPENMC_CROSS_SECTIONS` and :envvar:`OPENMC_MULTIPOLE_LIBRARY`
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environment variables. Furthermore, to run unit tests for the :mod:`openmc.data`
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module, it is necessary to have ENDF/B-VII.1 data available and pointed to by
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the :envvar:`OPENMC_ENDF_DATA` environment variable. All data sources can be
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obtained using the ``tools/ci/travis-before-script.sh`` script.
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To execute the test suite, go to the ``tests/`` directory and run::
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pytest
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If you want to collect information about source line coverage in the Python API,
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you must have the `pytest-cov <https://pypi.python.org/pypi/pytest-cov>`_ plugin
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installed and run::
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pytest --cov=../openmc --cov-report=html
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Adding Tests to the Regression Suite
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------------------------------------
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To add a new test to the regression test suite, create a sub-directory in the
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``tests/regression_tests/`` directory. To configure a test you need to add the
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following files to your new test directory:
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* OpenMC input XML files, if they are not generated through the Python API
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* **test.py** - Python test driver script; please refer to other tests to
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see how to construct. Any output files that are generated during testing
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must be removed at the end of this script.
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* **inputs_true.dat** - ASCII file that contains Python API-generated XML
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files concatenated together. When the test is run, inputs that are
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generated are compared to this file.
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* **results_true.dat** - ASCII file that contains the expected results from
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the test. The file *results_test.dat* is compared to this file during the
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execution of the python test driver script. When the above files have been
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created, generate a *results_test.dat* file and copy it to this name and
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commit. It should be noted that this file should be generated with basic
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compiler options during openmc configuration and build (e.g., no MPI, no
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debug/optimization).
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In addition to this description, please see the various types of tests that are
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already included in the test suite to see how to create them. If all is
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implemented correctly, the new test will automatically be discovered by pytest.
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@ -89,139 +89,6 @@ features and bug fixes. The general steps for contributing are as follows:
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6. After the pull request has been thoroughly vetted, it is merged back into the
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*develop* branch of mit-crpg/openmc.
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.. _test suite:
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OpenMC Test Suite
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-----------------
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The purpose of this test suite is to ensure that OpenMC compiles using various
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combinations of compiler flags and options, and that all user input options can
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be used successfully without breaking the code. The test suite is comprised of
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regression tests where different types of input files are configured and the
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full OpenMC code is executed. Results from simulations are compared with
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expected results. The test suite is comprised of many build configurations
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(e.g. debug, mpi, hdf5) and the actual tests which reside in sub-directories
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in the tests directory. We recommend to developers to test their branches
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before submitting a formal pull request using gfortran and Intel compilers
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if available.
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The test suite is designed to integrate with cmake using ctest_. It is
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configured to run with cross sections from NNDC_ augmented with 0 K elastic
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scattering data for select nuclides as well as multipole data. To download the
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proper data, run the following commands:
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.. code-block:: sh
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wget -O nndc_hdf5.tar.xz $(cat <openmc_root>/.travis.yml | grep anl.box | awk '{print $2}')
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tar xJvf nndc_hdf5.tar.xz
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export OPENMC_CROSS_SECTIONS=$(pwd)/nndc_hdf5/cross_sections.xml
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git clone --branch=master git://github.com/smharper/windowed_multipole_library.git wmp_lib
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tar xzvf wmp_lib/multipole_lib.tar.gz
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export OPENMC_MULTIPOLE_LIBRARY=$(pwd)/multipole_lib
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The test suite can be run on an already existing build using:
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.. code-block:: sh
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cd build
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make test
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or
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.. code-block:: sh
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cd build
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ctest
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There are numerous ctest_ command line options that can be set to have
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more control over which tests are executed.
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Before running the test suite python script, the following environmental
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variables should be set if the default paths are incorrect:
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* **FC** - The command for a Fortran compiler (e.g. gfotran, ifort).
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* Default - *gfortran*
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* **CC** - The command for a C compiler (e.g. gcc, icc).
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* Default - *gcc*
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* **CXX** - The command for a C++ compiler (e.g. g++, icpc).
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* Default - *g++*
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* **MPI_DIR** - The path to the MPI directory.
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* Default - */opt/mpich/3.2-gnu*
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* **HDF5_DIR** - The path to the HDF5 directory.
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* Default - */opt/hdf5/1.8.16-gnu*
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* **PHDF5_DIR** - The path to the parallel HDF5 directory.
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* Default - */opt/phdf5/1.8.16-gnu*
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To run the full test suite, the following command can be executed in the
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tests directory:
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.. code-block:: sh
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python run_tests.py
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A subset of build configurations and/or tests can be run. To see how to use
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the script run:
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.. code-block:: sh
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python run_tests.py --help
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As an example, say we want to run all tests with debug flags only on tests
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that have cone and plot in their name. Also, we would like to run this on
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4 processors. We can run:
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.. code-block:: sh
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python run_tests.py -j 4 -C debug -R "cone|plot"
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Note that standard regular expression syntax is used for selecting build
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configurations and tests. To print out a list of build configurations, we
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can run:
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.. code-block:: sh
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python run_tests.py -p
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Adding tests to test suite
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++++++++++++++++++++++++++
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To add a new test to the test suite, create a sub-directory in the tests
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directory that conforms to the regular expression *test_*. To configure
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a test you need to add the following files to your new test directory,
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*test_name* for example:
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* OpenMC input XML files
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* **test_name.py** - Python test driver script, please refer to other
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tests to see how to construct. Any output files that are generated
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during testing must be removed at the end of this script.
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* **inputs_true.dat** - ASCII file that contains Python API-generated XML
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files concatenated together. When the test is run, inputs that are
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generated are compared to this file.
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* **results_true.dat** - ASCII file that contains the expected results
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from the test. The file *results_test.dat* is compared to this file
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during the execution of the python test driver script. When the
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above files have been created, generate a *results_test.dat* file and
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copy it to this name and commit. It should be noted that this file
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should be generated with basic compiler options during openmc
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configuration and build (e.g., no MPI/HDF5, no debug/optimization).
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In addition to this description, please see the various types of tests that
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are already included in the test suite to see how to create them. If all is
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implemented correctly, the new test directory will automatically be added
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to the CTest framework.
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Private Development
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-------------------
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@ -364,7 +364,7 @@ Testing Build
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To run the test suite, you will first need to download a pre-generated cross
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section library along with windowed multipole data. Please refer to our
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:ref:`test suite` documentation for further details.
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:ref:`devguide_tests` documentation for further details.
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--------------------
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Python Prerequisites
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@ -168,8 +168,8 @@ ENDF/B-VII.1. It has the following optional arguments:
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This script downloads `ENDF/B-VII.1 ACE data
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<http://www.nndc.bnl.gov/endf/b7.1/acefiles.html>`_ from NNDC and converts it to
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an HDF5 library for use with OpenMC. This data is used for OpenMC's regression
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test suite. This script has the following optional arguments:
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an HDF5 library for use with OpenMC. This script has the following optional
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arguments:
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-b, --batch Suppress standard in
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@ -1,58 +1 @@
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=================
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OpenMC Test Suite
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=================
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The purpose of this test suite is to ensure that OpenMC compiles using various
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combinations of compiler flags and options and that all user input options can
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be used successfully without breaking the code. The test suite is based on
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regression or integrated testing where different types of input files are
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configured and the full OpenMC code is executed. Results from simulations
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are compared with expected results. The test suite is comprised of many
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build configurations (e.g. debug, mpi, hdf5) and the actual tests which
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reside in sub-directories in the tests directory.
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The test suite is designed to integrate with cmake using ctest_. To run the
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full test suite run:
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.. code-block:: sh
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python run_tests.py
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The test suite is configured to run with cross sections from NNDC_. To
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download these cross sections please do the following:
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.. code-block:: sh
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cd ../data
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python get_nndc.py
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export CROSS_SECTIONS=<path_to_data_folder>/nndc/cross_sections.xml
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The environmental variable **CROSS_SECTIONS** can be used to quickly switch
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between the cross sections set for the test suite and cross section set for
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your simulations.
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A subset of build configurations and/or tests can be run. To see how to use
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the script run:
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.. code-block:: sh
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python run_tests.py --help
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As an example, say we want to run all tests with debug flags only on tests
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that have cone and plot in their name. Also, we would like to run this on
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4 processors. We can run:
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.. code-block:: sh
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python run_tests.py -j 4 -C debug -R "cone|plot"
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Note that standard regular expression syntax is used for selecting build
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configurations and tests. To print out a list of build configurations, we
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can run:
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.. code-block:: sh
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python run_tests.py -p
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.. _ctest: http://www.cmake.org/cmake/help/v2.8.12/ctest.html
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.. _NNDC: http://http://www.nndc.bnl.gov/endf/b7.1/acefiles.html
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See docs/source/devguide/tests.rst for information on the OpenMC test suite.
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