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169 commits

Author SHA1 Message Date
Sterling Harper
55ab085e74 Make tally derivatives seperate objects 
Fix the OpenMP error by making these seperate objects threadprivate
 2016-01-30 22:58:40 -05:00
wbinventor@gmail.com
1e89fd53e6 Fixed typo in imports for statepoint.py 2016-01-28 13:50:11 -05:00
wbinventor@gmail.com
3d9353b086 Removed StatePoint.with_summary property 2016-01-28 13:41:08 -05:00
wbinventor@gmail.com
bd841a268f Fixed bug in StatePoint.with_summary property 2016-01-28 12:56:52 -05:00
Sterling Harper
e2c2f8c939 Merge remote-tracking branch 'upstream/develop' into diff_tally3 2016-01-18 16:25:38 -05:00
wbinventor@gmail.com
d6b30e9b37 Fixed small issue with new _aggregate_filter property in AggregateFilter created with last commit 2016-01-14 18:14:10 -05:00
wbinventor@gmail.com
95e6d27bd9 Renamed local filter variables so as not to shadow Python built-in filter method 2016-01-14 18:03:20 -05:00
wbinventor@gmail.com
1af9c8b6a2 Fixed bug when getting Pandas DataFrame from distribcell tally with 2D Lattice 2016-01-04 20:46:26 -05:00
Will Boyd
ffbc0b8a53 Merge pull request #538 from smharper/distribcell 
Move distribcell map indices from filters to cells
 2016-01-04 19:18:16 -05:00
Sam Shaner
8730a243c3 fixed typos in comments and descrptions in Python API 2016-01-04 12:47:43 -08:00
Sterling Harper
022d8d3a44 Replace filter % offset w/ cell % distribcell_ind 2015-12-28 23:14:05 -05:00
Sam Shaner
0174bbe093 changed n_user_scores to n_score_bins in statepoint.py 2015-12-22 15:35:46 -08:00
Sam Shaner
714f4ff2cc removed num_score_bins from tallies.py and removed duplicate scores from tests 2015-12-22 14:10:13 -08:00
Sam Shaner
a0160ad48a reverted to using num_score_bins in tallies.py 2015-12-17 15:07:32 -05:00
Sam Shaner
50519fe62d removed num_score_bins from Tally object and removed sum and sum_sq from tally arithmetic 2015-12-14 11:34:52 -05:00
Sterling Harper
d31fd3470c Add diff tallies to statepoints, PyAPI 2015-11-11 17:36:26 -05:00
Will Boyd
3a33f25501 Merge remote-tracking branch 'upstream/develop' into mgxs 2015-10-27 17:52:43 -04:00
Paul Romano
c2a53495cb Fix check when opening statepoint and fix documentation. Closes #464. 2015-10-26 05:29:25 -05:00
Will Boyd
e230ad3c8a Fixed merge conflict with develop 2015-10-26 00:11:37 -04:00
Paul Romano
8adce7670b Merge pull request #368 from samuelshaner/delayed-tallies 
Delayed nu fission score and delayed group filter
 2015-10-25 16:45:25 -05:00
Sam Shaner
a0193b13a5 fixed merging of tallies with delayedgroup filters in python API and other small issues 2015-10-23 17:27:28 -04:00
Sam Shaner
370a0f2677 added decoding of score in statepoint.py 2015-10-21 12:04:54 -04:00
Sam Shaner
7670e3847e modified regular expression code to be python 3 compatible 2015-10-21 11:59:04 -04:00
samuel shaner
82483b6490 generalized the insertion of the momemt order in statepoint.py 2015-10-20 19:46:59 +00:00
samuel shaner
37c4d9fa89 fixed issue with statepoint.py modifying delayed-nu-fission score 2015-10-20 15:35:14 +00:00
Will Boyd
4af0399742 Merged with pickle-tallies branch 2015-10-19 09:27:32 -04:00
Will Boyd
50e006dea9 Now only store StatePoint filename string in Tally class 2015-10-19 09:19:40 -04:00
Will Boyd
514eb2d40b Fixed bug in StatePoint.source property getter 2015-10-08 19:17:41 -04:00
Will Boyd
a83de39efb Now using Python ternary operator to shorten StatePoint property getters 2015-10-08 16:36:00 -04:00
Will Boyd
9c9eb446a1 Cleaning up docstrings for new tally arithmetic routines in tallies.py 2015-10-03 00:48:14 -04:00
Will Boyd
67971b5c60 Cleaned up docstring comments in filter.py and cross.py 2015-10-03 00:04:01 -04:00
Will Boyd
6e9dc5b09f Python API MultiGroupXS.load_from_statepoint(...) routine now resets domain type to get isotopic number densities from OpenMC 2015-09-27 17:14:29 -04:00
Will Boyd
4bf7fe5104 Fixed issue in Filter.is_subset(...) routine for energy filter types 2015-09-26 12:18:03 -04:00
Will Boyd
e05ab41527 Fixed merge conflicts with develop branch 2015-09-25 16:24:06 -04:00
Paul Romano
3d2fe2a0ef Few minor fixes for #454. Mesh ID is no longer written for statepoint. 2015-09-25 20:34:39 +07:00
Paul Romano
f3f6753820 Respond to remaining comments from @wbinventor on #454 2015-09-25 14:43:32 +07:00
Will Boyd
053c1d31a8 Multi-group Chi is now working with bug fixes to StatePoint.get_tally(...) 2015-09-21 21:17:18 -04:00
Paul Romano
23427ceccd Get rid of n_nuclides dataset in summary/statepoint 2015-09-21 11:43:29 +07:00
Paul Romano
397d5fe269 Update file format documentation. Use score_bins instead of scores. 2015-09-21 11:34:03 +07:00
Paul Romano
bc36dad028 Don't write cross section identifier for tally 'nuclides' dataset 2015-09-21 10:24:22 +07:00
Paul Romano
43fdeb41a1 Make sure std_dev is calculated if mean is negative. Don't set nuclides in 
link_with_summary. Update pandas-dataframe notebook.
 2015-09-21 10:01:26 +07:00
Paul Romano
da2bc6b6fe Write tally nuclides as array of strings for HDF5 files 2015-09-20 14:04:38 +07:00
Paul Romano
8753f23059 Change StructuredMesh to RegularMesh. Write type as 'regular'. 2015-09-20 14:04:34 +07:00
Paul Romano
9a0acdebc3 Write constant values as strings in HDF5 formats. This includes things like the 
run mode, tally estimator, filter type, tally scores, etc. Also do not write
nuclides in summary file.
 2015-09-20 13:55:15 +07:00
Paul Romano
bcbb8f6a3f Merge branch 'develop' into output-improvements 
Conflicts:
	openmc/statepoint.py
 2015-09-19 10:28:47 +07:00
Paul Romano
c57b2c22d9 Minor fix in StatePoint.std_dev property and plot-mesh-tally script 2015-09-18 22:05:50 +07:00
Paul Romano
3df61825cc Make filetype a string in HDF5 files. 2015-09-17 13:12:04 +07:00
Paul Romano
8b67fa7a92 Use structured array for global tallies with mean and std_dev fields 2015-09-17 07:21:04 +07:00
Sterling Harper
9ced99197b Add collision estimator to PyAPI 2015-09-16 18:04:44 -04:00
Paul Romano
c99c1f1870 Fix bug with source_present 2015-09-16 18:48:28 +07:00