1672 commits

Author	SHA1	Message	Date
Patrick Shriwise	f63ba31b55	Adding an option for reporting ID overlap between DAGMC and CSG geometry.	2021-05-19 18:01:35 -05:00
Patrick Shriwise	0a463be15e	Adding universe types again.	2021-05-19 18:01:35 -05:00
Patrick Shriwise	108c2a2f35	Adding surface and cell offsets to the DAGUniverse to recover surface and cell indices.	2021-05-19 17:42:40 -05:00
Patrick Shriwise	c35c8dae43	Reading DAGMC universes from the geometry.xml now.	2021-05-19 17:41:38 -05:00
Patrick Shriwise	249a5bb511	Adding an XML node constructor for the DAGUniverse.	2021-05-19 17:41:38 -05:00
Patrick Shriwise	a16c0916da	Using the DAGUniverse constructor to setup the DAGMC instance.	2021-05-19 17:41:38 -05:00
Patrick Shriwise	ef21ec493b	Returning universe index from the original dagmc function now.	2021-05-19 17:41:38 -05:00
Patrick Shriwise	be5318fdb0	Reorganizing some of the DAGMC-related code and using shared pointers instead.	2021-05-19 17:41:38 -05:00
Paul Romano	43804fc09d	Merge branch 'develop' into rng-stream-changes	2021-05-11 16:53:10 -05:00
Gavin Ridley	2d6ac3fede	add reference to paper	2021-05-11 13:58:43 -04:00
Gavin Ridley	a4b879ae11	additional documentation, make name changes more consistent	2021-05-08 18:51:49 -04:00
Gavin Ridley	50d0430496	std::make_unique -> make_unique	2021-05-04 15:55:08 -04:00
Gavin Ridley	0ffe7a5d2a	pass ints by value, not const reference	2021-05-03 18:03:06 -04:00
Gavin Ridley	f54b10d0f8	reverse find and replace mistake	2021-05-03 18:03:06 -04:00
Gavin Ridley	061156e79a	address PR comments	2021-05-03 18:03:06 -04:00
Gavin Ridley	f0e1110e01	somehow changes to lattice methods were lost	2021-05-03 18:03:05 -04:00
Gavin Ridley	af6d182440	use accessors for dagmc variables	2021-05-03 18:01:29 -04:00
Gavin Ridley	d63f64226e	small fix to array initialization	2021-05-03 18:01:29 -04:00
Gavin Ridley	ac59bb7564	add array header	2021-05-03 18:01:29 -04:00
Gavin Ridley	ad4e1c9f4a	remove std:: from vector,unique_ptr,make_unique,array	2021-05-03 18:01:27 -04:00
Gavin Ridley	2af4c9cd92	use base class to handle layout of particle data	2021-05-03 17:57:41 -04:00
Gavin Ridley	5cf8482d9a	have collision filter use particle accessors	2021-05-03 17:57:00 -04:00
Gavin Ridley	d5d2072266	change particle to using accessor methods	2021-05-03 17:56:57 -04:00
Gavin Ridley	711c60ea15	cherry pick fixes	2021-05-03 17:53:03 -04:00
Paul Romano	1e1bfb40f1	Add uniform_distribution function for clarity	2021-05-03 09:43:09 -05:00
Paul Romano	f0aaac4601	Move distributions into random_dist.h/cpp	2021-05-03 09:43:09 -05:00
Paul Romano	e0e5936b79	Remove separate RNG stream for photons	2021-05-03 09:43:09 -05:00
Paul Romano	8a07feebcb	Sample isotropic direction consistently	2021-05-03 09:43:09 -05:00
Paul Romano	c64e64dac2	Replace pi constant with more accurate version	2021-05-03 09:43:09 -05:00
Paul Romano	03244d755f	Update physical constants to CODATA 2018	2021-05-03 09:43:09 -05:00
Paul Romano	7ef73f048d	Remove special treatment of mu for fission	2021-05-03 09:43:09 -05:00
Patrick Shriwise	73aef414ca	Updating variable names of the methods.	2021-04-28 00:24:10 -05:00
Patrick Shriwise	0488f58941	Exposing translation getting/setting through CAPI	2021-04-28 00:24:10 -05:00
Patrick Shriwise	f48f6c6ab8	Condensing filter translation into single commit.	2021-04-28 00:24:10 -05:00
Paul Romano	f813c45810	Merge pull request #1798 from ameliajo/collisionFilter ... Added Collision filter	2021-04-09 08:03:02 -05:00
Patrick Shriwise	1262bcde7d	Apply @paulromano's suggestions from code review ... Co-authored-by: Paul Romano <paul.k.romano@gmail.com>	2021-04-07 19:07:07 -05:00
Patrick Shriwise	fd00bd94b2	Relying on the libmesh communicator to create new mesh instances.	2021-04-07 19:07:07 -05:00
Patrick Shriwise	c798b6c651	Fix docstring typo.	2021-04-07 19:07:07 -05:00
Patrick Shriwise	9c3ee5daa5	Removing superfluous public section.	2021-04-07 19:07:07 -05:00
Patrick Shriwise	6156e1b3ae	Storing the first element ID rather than its pointer.	2021-04-07 19:07:07 -05:00
Patrick Shriwise	7a2f1d6d0a	Updating unstructured mesh writing to use the nuclide_score tally method and putting variable addition back into its own loop.	2021-04-07 19:07:07 -05:00
Patrick Shriwise	7b6bf93afd	Adding function for retrieving the name of a nuclide from a tally.	2021-04-07 19:07:07 -05:00
Patrick Shriwise	9fec4b4b3e	Some improvements to readability and moving to removal of all scores from mesh instances in one step.	2021-04-07 19:07:07 -05:00
Patrick Shriwise	6c7c0a6816	Addressing initial review comments from @paulromano.	2021-04-07 19:07:07 -05:00
Patrick Shriwise	9eb53a1af9	Apply suggestions from code review ... Co-authored-by: Paul Romano <paul.k.romano@gmail.com>	2021-04-07 19:07:07 -05:00
Patrick Shriwise	324d349459	Back to a vector of point locators.	2021-04-07 19:07:07 -05:00
Patrick Shriwise	b982704d4f	Addressing @aprilnovak's PR comments.	2021-04-07 19:07:06 -05:00
Patrick Shriwise	c749b00bf7	Updating formatting of unstructured mesh functions.	2021-04-07 19:07:06 -05:00
Patrick Shriwise	6b91138957	Some cleanup of the mesh source files.	2021-04-07 19:07:06 -05:00
Patrick Shriwise	040c5b9bd4	Removing libmesh include from settings header.	2021-04-07 19:07:06 -05:00