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Updated README and scripts

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This commit is contained in:
Adam Parler 2023-10-31 23:41:42 -07:00
parent 6adb8fa2e0
commit df1f10aa3b
3 changed files with 58 additions and 6 deletions
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7
BEAVRS/run.sh Executable file
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#!/bin/bash
conda activate openmc-env
export OPENMC_CROSS_SECTIONS=${PWD}/cross_sections.xml
export OMP_SCHEDULE=dynamic,1
nohup python make_beavrs.py > stdout 2>&1 &

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README.md
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This repository is amalgamation of various simulations I found interesting. They are joined together to make one giant simulation repo. This repository is amalgamation of various simulations I found interesting. They are joined together to make one giant simulation repo.
Files have been updated to run with `v0.13.3` of [OpenMC](https://github.com/openmc-dev/openmc/tree/v0.13.3) Files have been updated to run with `v0.13.3` of [OpenMC](https://github.com/openmc-dev/openmc/tree/v0.13.3)
## Prerequisites
OpenMC, NumPy, Matplotlib, h5py

53
setup.sh
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@ -5,22 +5,30 @@ BASE_DIR=/opt/
##### DOWNLOAD DATA ##### ##### DOWNLOAD DATA #####
mkdir -p $BASE_DIR/xdata && cd $BASE_DIR/xdata mkdir -p $BASE_DIR/xdata && cd $BASE_DIR/xdata
wget -O endfb71.tar.xz https://anl.box.com/shared/static/9igk353zpy8fn9ttvtrqgzvw1vtejoz6.xz wget -c -O endfb71.tar.xz https://anl.box.com/shared/static/9igk353zpy8fn9ttvtrqgzvw1vtejoz6.xz
tar -xf endfb71.tar.xz tar -xf endfb71.tar.xz
wget -O endfb80.tar.xz https://anl.box.com/shared/static/uhbxlrx7hvxqw27psymfbhi7bx7s6u6a.xz wget -c -O endfb80.tar.xz https://anl.box.com/shared/static/uhbxlrx7hvxqw27psymfbhi7bx7s6u6a.xz
tar -xf endfb80.tar.xz tar -xf endfb80.tar.xz
wget -O jeff33.tar.xz https://anl.box.com/shared/static/4jwkvrr9pxlruuihcrgti75zde6g7bum.xz wget -c -O jeff33.tar.xz https://anl.box.com/shared/static/4jwkvrr9pxlruuihcrgti75zde6g7bum.xz
tar -xf jeff33.tar.xz tar -xf jeff33.tar.xz
wget -O lib80x.tar.xz https://anl.box.com/shared/static/nd7p4jherolkx4b1rfaw5uqp58nxtstr.xz wget -c -O lib80x.tar.xz https://anl.box.com/shared/static/nd7p4jherolkx4b1rfaw5uqp58nxtstr.xz
tar -xf lib80x.tar.xz tar -xf lib80x.tar.xz
wget -O fendl32.tar.xz https://anl.box.com/shared/static/3cb7jetw7tmxaw6nvn77x6c578jnm2ey.xz wget -c -O fendl32.tar.xz https://anl.box.com/shared/static/3cb7jetw7tmxaw6nvn77x6c578jnm2ey.xz
tar -xf fendl32.tar.xz tar -xf fendl32.tar.xz
git clone https://github.com/ahmedkmadani/OpenMCProject.git openmc-test wget -c -O endfb-vii.1-hdf5/chain_endfb71_pwr.xml https://anl.box.com/shared/static/os1u896bwsbopurpgas72bi6aij2zzdc.xml
wget -c -O endfb-vii.1-hdf5/chain_endfb71_sfr.xml https://anl.box.com/shared/static/9058zje1gm0ekd93hja542su50pccvj0.xml
wget -c -O endfb-viii.0-hdf5/chain_endfb80_pwr.xml https://anl.box.com/shared/static/nyezmyuofd4eqt6wzd626lqth7wvpprr.xml
wget -c -O endfb-viii.0-hdf5/chain_endfb80_sfr.xml https://anl.box.com/shared/static/x3kp739hr5upmeqpbwx9zk9ep04fnmtg.xml
mkdir casl_deplete
wget -c -O casl_deplete/chain_casl_pwr.xml https://anl.box.com/shared/static/3nvnasacm2b56716oh5hyndxdyauh5gs.xml
wget -c -O casl_deplete/chain_casl_sfr.xml https://anl.box.com/shared/static/9fqbq87j0tx4m6vfl06pl4ccc0hwamg9.xml
######################### #########################
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## to the top of any Notebook files you use ## to the top of any Notebook files you use
openmc -g -n 1000000 -s 32 -t -e problem openmc -g -n 1000000 -s 32 -t -e problem
########## INSTALL OPENMC FROM SOURCE ################
module load gcc/8.1.0 openmpi/4.1.4 cmake/3.26.3 git/2.42.0 python/3.11.5
git clone --recurse-submodules https://github.com/openmc-dev/openmc.git
cd openmc
git checkout v0.13.3
mkdir build && cd build
HDF5_ROOT=/share/apps/hdf5-withmpi/gcc/8.1.0/openmpi/4.1.4 \
cmake .. -DOPENMC_USE_OPENMP=on -DOPENMC_USE_MPI=on -DHDF5_PREFER_PARALLEL=on \
-DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=$HOME/openmc
make -j24
make -j24 install
cd ..
MPICC=${MPI_ROOT}/bin/mpicc pip3 install mpi4py
CC=/share/apps/openmpi/4.1.4/gcc/8.1.0/bin/mpicc HDF5_MPI=ON \
HDF5_DIR=/share/apps/hdf5-withmpi/gcc/8.1.0/openmpi/4.1.4 \
pip3 install --no-binary=h5py h5py
PATH=${HOME}/openmc/bin:${PATH}
PATH=${PATH}/.local/bin:${PATH}
export PATH
pip3 install .